Literature DB >> 15589837

Perturbation of the conformational equilibria in Ras by selective mutations as studied by 31P NMR spectroscopy.

Michael Spoerner1, Alfred Wittinghofer, Hans Robert Kalbitzer.   

Abstract

Ras regulates a variety of different signal transduction pathways acting as molecular switch. It was shown by liquid and solid-state (31)P NMR spectroscopy that Ras exists in the guanosine-5'-(beta,gamma-imido)triphosphate bound form in at least two conformational states interconverting in millisecond time scale. The relative population between the two conformational states affects drastically the affinity of Ras to its effectors. (31)P NMR spectroscopy shows that the conformational equilibrium can be shifted specifically by point mutations, including mutations with oncogenic potential, thus modifying the effector interactions and their coupling to dynamic properties of the protein.

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Year:  2004        PMID: 15589837     DOI: 10.1016/j.febslet.2004.11.020

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  28 in total

1.  Solution structure of the state 1 conformer of GTP-bound H-Ras protein and distinct dynamic properties between the state 1 and state 2 conformers.

Authors:  Mitsugu Araki; Fumi Shima; Yoko Yoshikawa; Shin Muraoka; Yuichi Ijiri; Yuka Nagahara; Tomoya Shirono; Tohru Kataoka; Atsuo Tamura
Journal:  J Biol Chem       Date:  2011-09-19       Impact factor: 5.157

2.  Relation between the conformational heterogeneity and reaction cycle of Ras: molecular simulation of Ras.

Authors:  Chigusa Kobayashi; Shinji Saito
Journal:  Biophys J       Date:  2010-12-01       Impact factor: 4.033

3.  Structural basis for conformational dynamics of GTP-bound Ras protein.

Authors:  Fumi Shima; Yuichi Ijiri; Shin Muraoka; Jingling Liao; Min Ye; Mitsugu Araki; Kousuke Matsumoto; Naoki Yamamoto; Takeshi Sugimoto; Yoko Yoshikawa; Takashi Kumasaka; Masaki Yamamoto; Atsuo Tamura; Tohru Kataoka
Journal:  J Biol Chem       Date:  2010-05-17       Impact factor: 5.157

4.  Critical roles of interactions among switch I-preceding residues and between switch II and its neighboring alpha-helix in conformational dynamics of the GTP-bound Ras family small GTPases.

Authors:  Kousuke Matsumoto; Fumi Shima; Shin Muraoka; Mitsugu Araki; Lizhi Hu; Yuichi Ijiri; Rina Hirai; Jingling Liao; Takashi Yoshioka; Takashi Kumasaka; Masaki Yamamoto; Atsuo Tamura; Tohru Kataoka
Journal:  J Biol Chem       Date:  2011-03-09       Impact factor: 5.157

5.  High pressure 31P NMR spectroscopy on guanine nucleotides.

Authors:  Michael Spoerner; Matthias Karl; Pedro Lopes; Marcus Hoering; Karoline Loeffel; Andrea Nuehs; Joseph Adelsberger; Werner Kremer; Hans Robert Kalbitzer
Journal:  J Biomol NMR       Date:  2016-12-23       Impact factor: 2.835

6.  Integrated RAS signaling defined by parallel NMR detection of effectors and regulators.

Authors:  Matthew J Smith; Mitsuhiko Ikura
Journal:  Nat Chem Biol       Date:  2014-01-19       Impact factor: 15.040

7.  Ras Binder Induces a Modified Switch-II Pocket in GTP and GDP States.

Authors:  Daniel R Gentile; Manoj K Rathinaswamy; Meredith L Jenkins; Steven M Moss; Braden D Siempelkamp; Adam R Renslo; John E Burke; Kevan M Shokat
Journal:  Cell Chem Biol       Date:  2017-10-12       Impact factor: 8.116

8.  Oncogenic and RASopathy-associated K-RAS mutations relieve membrane-dependent occlusion of the effector-binding site.

Authors:  Mohammad T Mazhab-Jafari; Christopher B Marshall; Matthew J Smith; Geneviève M C Gasmi-Seabrook; Peter B Stathopulos; Fuyuhiko Inagaki; Lewis E Kay; Benjamin G Neel; Mitsuhiko Ikura
Journal:  Proc Natl Acad Sci U S A       Date:  2015-05-04       Impact factor: 11.205

9.  Improved binding of raf to Ras.GDP is correlated with biological activity.

Authors:  Christina Kiel; Daniel Filchtinski; Michael Spoerner; Gideon Schreiber; Hans Robert Kalbitzer; Christian Herrmann
Journal:  J Biol Chem       Date:  2009-09-23       Impact factor: 5.157

10.  Effector proteins exert an important influence on the signaling-active state of the small GTPase Cdc42.

Authors:  Matthew J Phillips; Guillermo Calero; Britton Chan; Sekar Ramachandran; Richard A Cerione
Journal:  J Biol Chem       Date:  2008-03-18       Impact factor: 5.157

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