Literature DB >> 28012125

High pressure 31P NMR spectroscopy on guanine nucleotides.

Michael Spoerner1, Matthias Karl1, Pedro Lopes1, Marcus Hoering1, Karoline Loeffel1, Andrea Nuehs1, Joseph Adelsberger1, Werner Kremer1, Hans Robert Kalbitzer2.   

Abstract

The 31P NMR pressure response of guanine nucleotides bound to proteins has been studied in the past for characterizing the pressure perturbation of conformational equilibria. The pressure response of the 31P NMR chemical shifts of the phosphate groups of GMP, GDP, and GTP as well as the commonly used GTP analogs GppNHp, GppCH2p and GTPγS was measured in the absence and presence of Mg2+-ions within a pressure range up to 200 MPa. The pressure dependence of chemical shifts is clearly non-linear. For all nucleotides a negative first order pressure coefficient B 1 was determined indicating an upfield shift of the resonances with pressure. With exception of the α-phosphate group of Mg2GMP and Mg2+·GppNHp the second order pressure coefficients are positive. To describe the data of Mg2+·GppCH2p and GTPγS a Taylor expansion of 3rd order is required. For distinguishing pH effects from pressure effects a complete pH titration set is presented for GMP, as well as GDP and GTP in absence and presence of Mg2+ ions using indirect referencing to DSS under identical experimental conditions. By a comparison between high pressure 31P NMR data on free Mg2+-GDP and Mg2+-GDP in complex with the proto-oncogene Ras we demonstrate that pressure induced changes in chemical shift are clearly different between both forms.

Entities:  

Keywords:  31P NMR; GDP; GMP; GTP; GTP analogs; Guanine nucleotide; High pressure NMR spectroscopy

Mesh:

Substances:

Year:  2016        PMID: 28012125     DOI: 10.1007/s10858-016-0079-0

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  35 in total

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Journal:  Chem Rev       Date:  2016-01-27       Impact factor: 60.622

2.  Slow conformational dynamics of the guanine nucleotide-binding protein Ras complexed with the GTP analogue GTPgammaS.

Authors:  Michael Spoerner; Andrea Nuehs; Christian Herrmann; Guido Steiner; Hans Robert Kalbitzer
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Journal:  J Am Chem Soc       Date:  2009-11-25       Impact factor: 15.419

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Authors:  A Nakano; T Miyazawa; S Nakamura; Y Kaziro
Journal:  FEBS Lett       Date:  1980-07-11       Impact factor: 4.124

6.  Metal-bis(2-picolyl)amine complexes as state 1(T) inhibitors of activated Ras protein.

Authors:  Ina C Rosnizeck; Michael Spoerner; Tobias Harsch; Sandra Kreitner; Daniel Filchtinski; Christian Herrmann; Daniel Engel; Burkhard König; Hans Robert Kalbitzer
Journal:  Angew Chem Int Ed Engl       Date:  2012-09-20       Impact factor: 15.336

7.  Conformational states of the nuclear GTP-binding protein Ran and its complexes with the exchange factor RCC1 and the effector protein RanBP1.

Authors:  M Geyer; R Assheuer; C Klebe; J Kuhlmann; J Becker; A Wittinghofer; H R Kalbitzer
Journal:  Biochemistry       Date:  1999-08-31       Impact factor: 3.162

8.  Conformational states of human rat sarcoma (Ras) protein complexed with its natural ligand GTP and their role for effector interaction and GTP hydrolysis.

Authors:  Michael Spoerner; Constantin Hozsa; Johann A Poetzl; Kerstin Reiss; Petra Ganser; Matthias Geyer; Hans Robert Kalbitzer
Journal:  J Biol Chem       Date:  2010-10-11       Impact factor: 5.157

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Authors:  Werner Kremer; Guido Steiner; Sophie Béraud-Dufour; Hans Robert Kalbitzer
Journal:  J Biol Chem       Date:  2004-01-22       Impact factor: 5.157

10.  The RalB-RLIP76 complex reveals a novel mode of ral-effector interaction.

Authors:  R Brynmor Fenwick; Louise J Campbell; Karthik Rajasekar; Sunil Prasannan; Daniel Nietlispach; Jacques Camonis; Darerca Owen; Helen R Mott
Journal:  Structure       Date:  2010-08-11       Impact factor: 5.006

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3.  Synthesis of [7-15N]-GTPs for RNA structure and dynamics by NMR spectroscopy.

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4.  Direct observation of dynamic protein interactions involving human microtubules using solid-state NMR spectroscopy.

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