Literature DB >> 15581887

Structure of Ca2+ release channel at 14 A resolution.

Irina I Serysheva1, Susan L Hamilton, Wah Chiu, Steven J Ludtke.   

Abstract

The 14 A resolution structure of the 2.3 MDa Ca2+ release channel (also known as RyR1) was determined by electron cryomicroscopy and single particle reconstruction. This structure was produced using collected data used for our previous published structures at 22-30 A resolution, but now taking advantage of recent algorithmic improvements in the EMAN software suite. This improved map clearly exhibits more structural detail and allows better defined docking of computationally predicted structural domain folds. Using sequence-based fold recognition, the N-terminal region of RyR1, residues 216-572, was predicted to have significant structural similarity with the IP3-binding core region of the type 1 IP3R. This putative structure was computationally localized to the clamp-shaped region of RyR1, which has been implicated to have a regulatory role in the channel activity.

Entities:  

Mesh:

Substances:

Year:  2005        PMID: 15581887      PMCID: PMC2978512          DOI: 10.1016/j.jmb.2004.10.073

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  30 in total

1.  Enhanced genome annotation using structural profiles in the program 3D-PSSM.

Authors:  L A Kelley; R M MacCallum; M J Sternberg
Journal:  J Mol Biol       Date:  2000-06-02       Impact factor: 5.469

2.  A 11.5 A single particle reconstruction of GroEL using EMAN.

Authors:  S J Ludtke; J Jakana; J L Song; D T Chuang; W Chiu
Journal:  J Mol Biol       Date:  2001-11-23       Impact factor: 5.469

3.  Bridging the information gap: computational tools for intermediate resolution structure interpretation.

Authors:  W Jiang; M L Baker; S J Ludtke; W Chiu
Journal:  J Mol Biol       Date:  2001-05-18       Impact factor: 5.469

4.  Phosphorylation-dependent regulation of ryanodine receptors: a novel role for leucine/isoleucine zippers.

Authors:  S O Marx; S Reiken; Y Hisamatsu; M Gaburjakova; J Gaburjakova; Y M Yang; N Rosemblit; A R Marks
Journal:  J Cell Biol       Date:  2001-05-14       Impact factor: 10.539

5.  Three-dimensional reconstruction of the recombinant type 3 ryanodine receptor and localization of its amino terminus.

Authors:  Z Liu; J Zhang; M R Sharma; P Li; S R Chen; T Wagenknecht
Journal:  Proc Natl Acad Sci U S A       Date:  2001-05-15       Impact factor: 11.205

6.  The skeletal muscle Ca2+ release channel has an oxidoreductase-like domain.

Authors:  Matthew L Baker; Irina I Serysheva; Serap Sencer; Yili Wu; Steven J Ludtke; Wen Jiang; Susan L Hamilton; Wah Chiu
Journal:  Proc Natl Acad Sci U S A       Date:  2002-09-06       Impact factor: 11.205

7.  Topology of the Ca2+ release channel of skeletal muscle sarcoplasmic reticulum (RyR1).

Authors:  Guo Guang Du; Bimal Sandhu; Vijay K Khanna; Xing Hua Guo; David H MacLennan
Journal:  Proc Natl Acad Sci U S A       Date:  2002-12-16       Impact factor: 11.205

8.  Two-state conformational changes in inositol 1,4,5-trisphosphate receptor regulated by calcium.

Authors:  Kozo Hamada; Tomoko Miyata; Kouta Mayanagi; Junji Hirota; Katsuhiko Mikoshiba
Journal:  J Biol Chem       Date:  2002-04-29       Impact factor: 5.157

9.  Structure of the skeletal muscle calcium release channel activated with Ca2+ and AMP-PCP.

Authors:  I I Serysheva; M Schatz; M van Heel; W Chiu; S L Hamilton
Journal:  Biophys J       Date:  1999-10       Impact factor: 4.033

10.  Structure of the inositol 1,4,5-trisphosphate receptor binding core in complex with its ligand.

Authors:  Ivan Bosanac; Jean-René Alattia; Tapas K Mal; Jenny Chan; Susanna Talarico; Frances K Tong; Kit I Tong; Fumio Yoshikawa; Teiichi Furuichi; Miwako Iwai; Takayuki Michikawa; Katsuhiko Mikoshiba; Mitsuhiko Ikura
Journal:  Nature       Date:  2002-11-17       Impact factor: 49.962

View more
  32 in total

Review 1.  IP(3) receptors: toward understanding their activation.

Authors:  Colin W Taylor; Stephen C Tovey
Journal:  Cold Spring Harb Perspect Biol       Date:  2010-10-27       Impact factor: 10.005

2.  Localization of a disease-associated mutation site in the three-dimensional structure of the cardiac muscle ryanodine receptor.

Authors:  Zheng Liu; Ruiwu Wang; Jing Zhang; S R Wayne Chen; Terence Wagenknecht
Journal:  J Biol Chem       Date:  2005-09-11       Impact factor: 5.157

3.  Internal structure and visualization of transmembrane domains of the RyR1 calcium release channel by cryo-EM.

Authors:  Montserrat Samsó; Terence Wagenknecht; P D Allen
Journal:  Nat Struct Mol Biol       Date:  2005-05-22       Impact factor: 15.369

4.  The pore structure of the closed RyR1 channel.

Authors:  Steven J Ludtke; Irina I Serysheva; Susan L Hamilton; Wah Chiu
Journal:  Structure       Date:  2005-08       Impact factor: 5.006

5.  Interpretation of electron density with stereographic roadmap projections.

Authors:  Chuan Xiao; Michael G Rossmann
Journal:  J Struct Biol       Date:  2006-10-24       Impact factor: 2.867

6.  Localization of an NH(2)-terminal disease-causing mutation hot spot to the "clamp" region in the three-dimensional structure of the cardiac ryanodine receptor.

Authors:  Ruiwu Wang; Wenqian Chen; Shitian Cai; Jing Zhang; Jeff Bolstad; Terence Wagenknecht; Zheng Liu; S R Wayne Chen
Journal:  J Biol Chem       Date:  2007-04-23       Impact factor: 5.157

Review 7.  Bridging the myoplasmic gap: recent developments in skeletal muscle excitation-contraction coupling.

Authors:  Roger A Bannister
Journal:  J Muscle Res Cell Motil       Date:  2007-09-26       Impact factor: 2.698

Review 8.  Inositol trisphosphate receptor Ca2+ release channels.

Authors:  J Kevin Foskett; Carl White; King-Ho Cheung; Don-On Daniel Mak
Journal:  Physiol Rev       Date:  2007-04       Impact factor: 37.312

9.  The amino-terminal disease hotspot of ryanodine receptors forms a cytoplasmic vestibule.

Authors:  Ching-Chieh Tung; Paolo A Lobo; Lynn Kimlicka; Filip Van Petegem
Journal:  Nature       Date:  2010-11-03       Impact factor: 49.962

10.  Single-particle cryo-EM of the ryanodine receptor channel in an aqueous environment.

Authors:  Mariah R Baker; Guizhen Fan; Irina I Serysheva
Journal:  Eur J Transl Myol       Date:  2015
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.