Literature DB >> 15579108

Crystallization of cytochromes P450 and substrate-enzyme interactions.

Huiying Li1, Thomas L Poulos.   

Abstract

Our understanding of structure-function relationships have made considerable advances owing to the increasing number of new P450 crystal structures. This is especially true with mammalian P450s. As always, the main bottleneck in a structure determination project is crystallization. While the crystallization techniques used for P450 crystal growth are not much different from that utilized for other proteins, special protein engineering strategies have been developed in order to generate soluble, homogeneous membrane-bound P450 samples amendable for crystallization. Newly determined P450 structures also provide convincing evidence that P450 enzymes are highly dynamic and flexible. Common structural elements found in all P450s have been identified that undergo large conformational changes to allow substrate access and product release. In addition, flexible regions may enable the active site to adapt to the binding of substrates of different size, shape, and polarity. This review will focus on the successful membrane P450 crystallization techniques and the new structural insights based on the growing P450 structure database.

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Year:  2004        PMID: 15579108     DOI: 10.2174/1568026043387205

Source DB:  PubMed          Journal:  Curr Top Med Chem        ISSN: 1568-0266            Impact factor:   3.295


  17 in total

1.  Conformational transitions and redox potential shifts of cytochrome P450 induced by immobilization.

Authors:  Smilja Todorovic; Christiane Jung; Peter Hildebrandt; Daniel H Murgida
Journal:  J Biol Inorg Chem       Date:  2005-12-03       Impact factor: 3.358

2.  The dynamics of camphor in the cytochrome P450 CYP101D2.

Authors:  Shabana Vohra; Maria Musgaard; Stephen G Bell; Luet-Lok Wong; Weihong Zhou; Philip C Biggin
Journal:  Protein Sci       Date:  2013-08-12       Impact factor: 6.725

3.  A numerical method for analysis of in vitro time-dependent inhibition data. Part 1. Theoretical considerations.

Authors:  Swati Nagar; Jeffrey P Jones; Ken Korzekwa
Journal:  Drug Metab Dispos       Date:  2014-06-17       Impact factor: 3.922

4.  A numerical method for analysis of in vitro time-dependent inhibition data. Part 2. Application to experimental data.

Authors:  Ken Korzekwa; Donald Tweedie; Upendra A Argikar; Andrea Whitcher-Johnstone; Leslie Bell; Shari Bickford; Swati Nagar
Journal:  Drug Metab Dispos       Date:  2014-06-17       Impact factor: 3.922

5.  Crystal structure of the human prostacyclin synthase.

Authors:  Chia-Wang Chiang; Hui-Chun Yeh; Lee-Ho Wang; Nei-Li Chan
Journal:  J Mol Biol       Date:  2006-09-20       Impact factor: 5.469

6.  Disease-causing mutations in proteins: structural analysis of the CYP1B1 mutations causing primary congenital glaucoma in humans.

Authors:  Malkaram S Achary; Aramati B M Reddy; Subhabrata Chakrabarti; Shirly G Panicker; Anil K Mandal; Niyaz Ahmed; Dorairajan Balasubramanian; Seyed E Hasnain; Hampapathalu A Nagarajaram
Journal:  Biophys J       Date:  2006-09-08       Impact factor: 4.033

7.  Expanding the binding envelope of CYP51 inhibitors targeting Trypanosoma cruzi with 4-aminopyridyl-based sulfonamide derivatives.

Authors:  Debora F Vieira; Jun Yong Choi; William R Roush; Larissa M Podust
Journal:  Chembiochem       Date:  2014-04-25       Impact factor: 3.164

8.  Crystal structures of cytochrome P450 2B4 in complex with the inhibitor 1-biphenyl-4-methyl-1H-imidazole: ligand-induced structural response through alpha-helical repositioning.

Authors:  Sean C Gay; Ling Sun; Keiko Maekawa; James R Halpert; C David Stout
Journal:  Biochemistry       Date:  2009-06-09       Impact factor: 3.162

9.  Structures of prostacyclin synthase and its complexes with substrate analog and inhibitor reveal a ligand-specific heme conformation change.

Authors:  Yi-Ching Li; Chia-Wang Chiang; Hui-Chun Yeh; Pei-Yung Hsu; Frank G Whitby; Lee-Ho Wang; Nei-Li Chan
Journal:  J Biol Chem       Date:  2007-11-21       Impact factor: 5.157

10.  Conformational dynamics in the F/G segment of CYP51 from Mycobacterium tuberculosis monitored by FRET.

Authors:  Galina I Lepesheva; Matej Seliskar; Charles G Knutson; Nina V Stourman; Damjana Rozman; Michael R Waterman
Journal:  Arch Biochem Biophys       Date:  2007-06-06       Impact factor: 4.013

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