Literature DB >> 15566767

Nested PCR for detection of BK virus and JC virus DNA.

G Bogdanovic1, M Brytting, P Cinque, M Grandien, E Fridell, P Ljungman, B Lönnqvist, A L Hammarin.   

Abstract

BACKGROUND: A nested polymerase chain reaction (PCR) was developed to detect BK virus (BKV) and JC virus (JCV) DNA sequences. The unique clevage site for BamHI restriction enzyme was located in the JCV amplimer and cleavage was used to differentiate between BKV and JCV. STUDY
DESIGN: Twenty-three urine specimens from 17 bone marrow recipients with haemorrhagic cystitis and one liver transplant patient were tested for the presence of BKV and JCV DNA. Four brain tissue specimens (paraffin embedded brain tissues and a fresh frozen brain biopsy) and 5 cerebrospinal fluids from 3 AIDS patients and one liver transplant patient, all with progressive multifocal leukoencephalopathy (PML), were also examined by PCR.
RESULTS: The sensitivity of the PCR was 10 genomes for each virus. BKV DNA was detected in 15 urine specimens from 12 bone marrow transplant patients. JCV DNA was detected in 4 cerebrospinal fluids and 4 brain tissues from patients with PML.
CONCLUSION: Our results show that the nested PCR is a sensitive and rapid assay that can be used for diagnosis of BKV and JCV infections. The cerebrospinal fluid appears to be a suitable material for diagnosis of JC virus reactivation in the brain.

Entities:  

Year:  1994        PMID: 15566767     DOI: 10.1016/0928-0197(94)90024-8

Source DB:  PubMed          Journal:  Clin Diagn Virol        ISSN: 0928-0197


  10 in total

1.  Polyomaviruria in renal transplant patients is not correlated to the cold ischemia period or to rejection episodes.

Authors:  P Priftakis; G Bogdanovic; G Tyden; T Dalianis
Journal:  J Clin Microbiol       Date:  2000-01       Impact factor: 5.948

2.  Detection of JC virus in cerebrospinal fluid (CSF) samples from patients with progressive multifocal leukoencephalopathy but not in CSF samples from patients with herpes simplex encephalitis, enteroviral meningitis, or multiple sclerosis.

Authors:  G Bogdanovic; P Priftakis; A L Hammarin; M Söderström; A Samuelson; I Lewensohn-Fuchs; T Dalianis
Journal:  J Clin Microbiol       Date:  1998-04       Impact factor: 5.948

3.  Association between a high BK virus load in urine samples of patients with graft-versus-host disease and development of hemorrhagic cystitis after hematopoietic stem cell transplantation.

Authors:  G Bogdanovic; P Priftakis; G Giraud; M Kuzniar; R Ferraldeschi; P Kokhaei; H Mellstedt; M Remberger; P Ljungman; J Winiarski; T Dalianis
Journal:  J Clin Microbiol       Date:  2004-11       Impact factor: 5.948

4.  Rapid quantification and differentiation of human polyomavirus DNA in undiluted urine from patients after bone marrow transplantation.

Authors:  S S Biel; T K Held; O Landt; M Niedrig; H R Gelderblom; W Siegert; A Nitsche
Journal:  J Clin Microbiol       Date:  2000-10       Impact factor: 5.948

5.  Analysis of PCR as a tool for detection of JC virus DNA in cerebrospinal fluid for diagnosis of progressive multifocal leukoencephalopathy.

Authors:  A L Hammarin; G Bogdanovic; V Svedhem; R Pirskanen; L Morfeldt; M Grandien
Journal:  J Clin Microbiol       Date:  1996-12       Impact factor: 5.948

Review 6.  Chronic viral infection and primary central nervous system malignancy.

Authors:  Robert Saddawi-Konefka; John R Crawford
Journal:  J Neuroimmune Pharmacol       Date:  2010-04-13       Impact factor: 4.147

7.  Identification of a third human polyomavirus.

Authors:  Tobias Allander; Kalle Andreasson; Shawon Gupta; Annelie Bjerkner; Gordana Bogdanovic; Mats A A Persson; Tina Dalianis; Torbjörn Ramqvist; Björn Andersson
Journal:  J Virol       Date:  2007-02-07       Impact factor: 5.103

8.  DNA from BK virus and JC virus and from KI, WU, and MC polyomaviruses as well as from simian virus 40 is not detected in non-UV-light-associated primary malignant melanomas of mucous membranes.

Authors:  Géraldine Giraud; Torbjörn Ramqvist; Boel Ragnarsson-Olding; Tina Dalianis
Journal:  J Clin Microbiol       Date:  2008-09-03       Impact factor: 5.948

9.  A globally applicable PCR-based detection and discrimination of BK and JC polyomaviruses.

Authors:  Leandro Magalhães de Souza; Flávia Savassi-Ribas; Stephanie G S de Almeida; Rubens Nei N da Silva; Camila F Baez; Mariano Gustavo Zalis; Maria Angelica Arpon Marandino Guimarães; Rafael Brandão Varella
Journal:  Rev Inst Med Trop Sao Paulo       Date:  2018-09-13       Impact factor: 1.846

10.  Discriminating between JCPyV and BKPyV in Urinary Virome Data Sets.

Authors:  Rita Mormando; Alan J Wolfe; Catherine Putonti
Journal:  Viruses       Date:  2021-05-31       Impact factor: 5.048

  10 in total

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