Literature DB >> 15559980

A perspective on cold enzymes: current knowledge and frequently asked questions.

J C Marx1, V Blaise, T Collins, S D'Amico, D Delille, E Gratia, A Hoyoux, A L Huston, G Sonan, G Feller, C Gerday.   

Abstract

Studies on psychrophilic enzymes to determine the structural features important for cold-activity have attracted increased attention in the last few years. This enhanced interest is due to the attractive properties of such proteins, i.e. a high specific activity and a low thermal stability, and thus, these enzymes constitute a tremendous potential for fundamental research and biotechnological applications. This review examines the impact of low temperatures on life, the diversity of adaptation to counteract these effects and gives an overview of the features proposed to account for low thermal stability and cold-activity, following the chronological order of the catalytic cycle phases. Moreover, we present an overview of recent techniques used in the analysis of the flexibility of a protein structure which is an important concept in cold-adaptation; an overview of biotechnological potential of psychrophilic enzymes and finally, a few frequently asked questions about cold-adaptation and their possible answers.

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Year:  2004        PMID: 15559980

Source DB:  PubMed          Journal:  Cell Mol Biol (Noisy-le-grand)        ISSN: 0145-5680            Impact factor:   1.770


  11 in total

1.  The psychrophilic lifestyle as revealed by the genome sequence of Colwellia psychrerythraea 34H through genomic and proteomic analyses.

Authors:  Barbara A Methé; Karen E Nelson; Jody W Deming; Bahram Momen; Eugene Melamud; Xijun Zhang; John Moult; Ramana Madupu; William C Nelson; Robert J Dodson; Lauren M Brinkac; Sean C Daugherty; Anthony S Durkin; Robert T DeBoy; James F Kolonay; Steven A Sullivan; Liwei Zhou; Tanja M Davidsen; Martin Wu; Adrienne L Huston; Matthew Lewis; Bruce Weaver; Janice F Weidman; Hoda Khouri; Terry R Utterback; Tamara V Feldblyum; Claire M Fraser
Journal:  Proc Natl Acad Sci U S A       Date:  2005-07-25       Impact factor: 11.205

Review 2.  Cold-loving microbes, plants, and animals--fundamental and applied aspects.

Authors:  R Margesin; G Neuner; K B Storey
Journal:  Naturwissenschaften       Date:  2006-10-13

3.  Essential genes from Arctic bacteria used to construct stable, temperature-sensitive bacterial vaccines.

Authors:  Barry N Duplantis; Milan Osusky; Crystal L Schmerk; Darrell R Ross; Catharine M Bosio; Francis E Nano
Journal:  Proc Natl Acad Sci U S A       Date:  2010-07-12       Impact factor: 11.205

4.  Thermodynamic stability of a cold-adapted protein, type III antifreeze protein, and energetic contribution of salt bridges.

Authors:  Olga García-Arribas; Roberto Mateo; Melanie M Tomczak; Peter L Davies; Mauricio G Mateu
Journal:  Protein Sci       Date:  2006-12-22       Impact factor: 6.725

5.  Molecular insights into cold active polygalacturonase enzyme for its potential application in food processing.

Authors:  L N Ramya; K K Pulicherla
Journal:  J Food Sci Technol       Date:  2014-11-26       Impact factor: 2.701

6.  Evolutionary force in confamiliar marine vertebrates of different temperature realms: adaptive trends in zoarcid fish transcriptomes.

Authors:  Heidrun Sigrid Windisch; Magnus Lucassen; Stephan Frickenhaus
Journal:  BMC Genomics       Date:  2012-10-11       Impact factor: 3.969

7.  Structure-dependent relationships between growth temperature of prokaryotes and the amino acid frequency in their proteins.

Authors:  Gisle Saelensminde; Øyvind Halskau; Ronny Helland; Nils-Peder Willassen; Inge Jonassen
Journal:  Extremophiles       Date:  2007-04-12       Impact factor: 3.035

8.  Molecular characterization of cold adaptation based on ortholog protein sequences from Vibrionaceae species.

Authors:  Steinar Thorvaldsen; Erik Hjerde; Chris Fenton; Nils P Willassen
Journal:  Extremophiles       Date:  2007-06-19       Impact factor: 3.035

9.  Evolutionarily conserved essential genes from arctic bacteria: a tool for vaccination.

Authors:  Mm Shanmugam; S Parasuraman
Journal:  J Young Pharm       Date:  2012-01

10.  Molecular characterization of cold adaptation of membrane proteins in the Vibrionaceae core-genome.

Authors:  Tim Kahlke; Steinar Thorvaldsen
Journal:  PLoS One       Date:  2012-12-17       Impact factor: 3.240

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