Literature DB >> 15548739

Translational regulation via 5' mRNA leader sequences revealed by mutational analysis of the Arabidopsis translation initiation factor subunit eIF3h.

Tae-Houn Kim1, Byung-Hoon Kim, Avital Yahalom, Daniel A Chamovitz, Albrecht G von Arnim.   

Abstract

Eukaryotic translation initiation factor 3 (eIF3) consists of core subunits that are conserved from yeast to man as well as less conserved, noncore, subunits with potential regulatory roles. Whereas core subunits tend to be indispensable for cell growth, the roles of the noncore subunits remain poorly understood. We addressed the hypothesis that eIF3 noncore subunits have accessory functions that help to regulate translation initiation, by focusing on the Arabidopsis thaliana eIF3h subunit. Indeed, eIF3h was not essential for general protein translation. However, results from transient expression assays and polysome fractionation indicated that the translation efficiency of specific 5' mRNA leader sequences was compromised in an eif3h mutant, including the mRNA for the basic domain leucine zipper (bZip) transcription factor ATB2/AtbZip11, translation of which is regulated by sucrose. Among other pleiotropic developmental defects, the eif3h mutant required exogenous sugar to transit from seedling to vegetative development, but it was hypersensitive to elevated levels of exogenous sugars. The ATB2 mRNA was rendered sensitive to the eIF3h level by a series of upstream open reading frames. Moreover, eIF3h could physically interact with subunits of the COP9 signalosome, a protein complex implicated primarily in the regulation of protein ubiquitination, supporting a direct biochemical connection between translation initiation and protein turnover. Together, these data implicate eIF3 in mRNA-associated translation initiation events, such as scanning, start codon recognition, or reinitiation and suggest that poor translation initiation of specific mRNAs contributes to the pleiotropic spectrum of phenotypic defects in the eif3h mutant.

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Year:  2004        PMID: 15548739      PMCID: PMC535877          DOI: 10.1105/tpc.104.026880

Source DB:  PubMed          Journal:  Plant Cell        ISSN: 1040-4651            Impact factor:   11.277


  73 in total

1.  Discrete domains mediate the light-responsive nuclear and cytoplasmic localization of Arabidopsis COP1.

Authors:  M G Stacey; S N Hicks; A G von Arnim
Journal:  Plant Cell       Date:  1999-03       Impact factor: 11.277

Review 2.  Repressors of photomorphogenesis.

Authors:  Tae-Houn Kim; Byung-Hoon Kim; Albrecht G von Arnim
Journal:  Int Rev Cytol       Date:  2002

3.  The late elongated hypocotyl mutation of Arabidopsis disrupts circadian rhythms and the photoperiodic control of flowering.

Authors:  R Schaffer; N Ramsay; A Samach; S Corden; J Putterill; I A Carré; G Coupland
Journal:  Cell       Date:  1998-06-26       Impact factor: 41.582

Review 4.  Making sense of the COP9 signalosome. A regulatory protein complex conserved from Arabidopsis to human.

Authors:  N Wei; X W Deng
Journal:  Trends Genet       Date:  1999-03       Impact factor: 11.639

5.  Sucrose-specific signalling represses translation of the Arabidopsis ATB2 bZIP transcription factor gene.

Authors:  F Rook; N Gerrits; A Kortstee; M van Kampen; M Borrias; P Weisbeek; S Smeekens
Journal:  Plant J       Date:  1998-07       Impact factor: 6.417

6.  The Arabidopsis homologue of an eIF3 complex subunit associates with the COP9 complex.

Authors:  B Karniol; A Yahalom; S Kwok; T Tsuge; M Matsui; X W Deng; D A Chamovitz
Journal:  FEBS Lett       Date:  1998-11-13       Impact factor: 4.124

7.  Two bZIP proteins from Antirrhinum flowers preferentially bind a hybrid C-box/G-box motif and help to define a new sub-family of bZIP transcription factors.

Authors:  J F Martínez-García; E Moyano; M J Alcocer; C Martin
Journal:  Plant J       Date:  1998-02       Impact factor: 6.417

8.  Inefficient reinitiation is responsible for upstream open reading frame-mediated translational repression of the maize R gene.

Authors:  L Wang; S R Wessler
Journal:  Plant Cell       Date:  1998-10       Impact factor: 11.277

9.  Complex formation by all five homologues of mammalian translation initiation factor 3 subunits from yeast Saccharomyces cerevisiae.

Authors:  K Asano; L Phan; J Anderson; A G Hinnebusch
Journal:  J Biol Chem       Date:  1998-07-17       Impact factor: 5.157

10.  MPN+, a putative catalytic motif found in a subset of MPN domain proteins from eukaryotes and prokaryotes, is critical for Rpn11 function.

Authors:  Vered Maytal-Kivity; Noa Reis; Kay Hofmann; Michael H Glickman
Journal:  BMC Biochem       Date:  2002-09-20       Impact factor: 4.059

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  51 in total

1.  Large-scale analysis of mRNA translation states during sucrose starvation in arabidopsis cells identifies cell proliferation and chromatin structure as targets of translational control.

Authors:  M Nicolaï; M A Roncato; A S Canoy; D Rouquié; X Sarda; G Freyssinet; C Robaglia
Journal:  Plant Physiol       Date:  2006-04-21       Impact factor: 8.340

2.  Sugar sensing and signaling.

Authors:  Matthew Ramon; Filip Rolland; Jen Sheen
Journal:  Arabidopsis Book       Date:  2008-10-22

3.  Non-core subunit eIF3h of translation initiation factor eIF3 regulates zebrafish embryonic development.

Authors:  Avik Choudhuri; Todd Evans; Umadas Maitra
Journal:  Dev Dyn       Date:  2010-06       Impact factor: 3.780

4.  The h subunit of eIF3 promotes reinitiation competence during translation of mRNAs harboring upstream open reading frames.

Authors:  Bijoyita Roy; Justin N Vaughn; Byung-Hoon Kim; Fujun Zhou; Michael A Gilchrist; Albrecht G Von Arnim
Journal:  RNA       Date:  2010-02-23       Impact factor: 4.942

5.  An oncogenic role for the phosphorylated h-subunit of human translation initiation factor eIF3.

Authors:  Lili Zhang; Zeljka Smit-McBride; Xiaoyu Pan; Jeanette Rheinhardt; John W B Hershey
Journal:  J Biol Chem       Date:  2008-06-10       Impact factor: 5.157

6.  MRF Family Genes Are Involved in Translation Control, Especially under Energy-Deficient Conditions, and Their Expression and Functions Are Modulated by the TOR Signaling Pathway.

Authors:  Du-Hwa Lee; Seung Jun Park; Chang Sook Ahn; Hyun-Sook Pai
Journal:  Plant Cell       Date:  2017-10-30       Impact factor: 11.277

Review 7.  Regulation of translation initiation in eukaryotes: mechanisms and biological targets.

Authors:  Nahum Sonenberg; Alan G Hinnebusch
Journal:  Cell       Date:  2009-02-20       Impact factor: 41.582

Review 8.  Heterogeneity and specialized functions of translation machinery: from genes to organisms.

Authors:  Naomi R Genuth; Maria Barna
Journal:  Nat Rev Genet       Date:  2018-07       Impact factor: 53.242

9.  TOR and S6K1 promote translation reinitiation of uORF-containing mRNAs via phosphorylation of eIF3h.

Authors:  Mikhail Schepetilnikov; Maria Dimitrova; Eder Mancera-Martínez; Angèle Geldreich; Mario Keller; Lyubov A Ryabova
Journal:  EMBO J       Date:  2013-03-22       Impact factor: 11.598

10.  Expression of human eukaryotic initiation factor 3f oscillates with cell cycle in A549 cells and is essential for cell viability.

Authors:  Ana E Higareda-Mendoza; Marco A Pardo-Galván
Journal:  Cell Div       Date:  2010-05-13       Impact factor: 5.130

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