Literature DB >> 15545723

The impact of chromosome sorting and painting on the comparative analysis of primate genomes.

M A Ferguson-Smith1, F Yang, W Rens, P C M O'Brien.   

Abstract

Chromosome sorting by flow cytometry is the main source of chromosome-specific DNA for the production of painting probes. These probes have been used for cross-species in situ hybridization in the construction of comparative maps, in the study of karyotype evolution and phylogenetics, in delineating territories in interphase nuclei, and in the analysis of chromosome breakpoints. We review here the contributions that this technology has made to the analysis of primate genomes. Copyright (c) 2005 S. Karger AG, Basel.

Mesh：

Year:  2005        PMID： 15545723     DOI： 10.1159/000080809

Source DB:  PubMed          Journal:  Cytogenet Genome Res        ISSN： 1424-8581            Impact factor:   1.636


  11 in total

Review 1.  The genome and the nucleus: a marriage made by evolution. Genome organisation and nuclear architecture.

Authors:  Helen A Foster; Joanna M Bridger
Journal:  Chromosoma       Date:  2005-10-15       Impact factor: 4.316

2.  Molecular refinement of gibbon genome rearrangements.

Authors:  Roberta Roberto; Oronzo Capozzi; Richard K Wilson; Elaine R Mardis; Mariana Lomiento; Eray Tuzun; Ze Cheng; Alan R Mootnick; Nicoletta Archidiacono; Mariano Rocchi; Evan E Eichler
Journal:  Genome Res       Date:  2006-12-21       Impact factor: 9.043

Review 3.  Primate chromosome evolution: ancestral karyotypes, marker order and neocentromeres.

Authors:  R Stanyon; M Rocchi; O Capozzi; R Roberto; D Misceo; M Ventura; M F Cardone; F Bigoni; N Archidiacono
Journal:  Chromosome Res       Date:  2008       Impact factor: 5.239

4.  Cross-species bacterial artificial chromosome-fluorescence in situ hybridization painting of the tomato and potato chromosome 6 reveals undescribed chromosomal rearrangements.

Authors:  Xiaomin Tang; Dóra Szinay; Chunting Lang; Munikote S Ramanna; Edwin A G van der Vossen; Erwin Datema; René Klein Lankhorst; Jan de Boer; Sander A Peters; Christian Bachem; Willem Stiekema; Richard G F Visser; Hans de Jong; Yuling Bai
Journal:  Genetics       Date:  2008-09-14       Impact factor: 4.562

5.  Chromhome: a rich internet application for accessing comparative chromosome homology maps.

Authors:  Sridevi Nagarajan; Willem Rens; James Stalker; Tony Cox; Malcolm A Ferguson-Smith
Journal:  BMC Bioinformatics       Date:  2008-03-26       Impact factor: 3.169

6.  Tracking the complex flow of chromosome rearrangements from the Hominoidea Ancestor to extant Hylobates and Nomascus Gibbons by high-resolution synteny mapping.

Authors:  Doriana Misceo; Oronzo Capozzi; Roberta Roberto; Maria P Dell'oglio; Mariano Rocchi; Roscoe Stanyon; Nicoletta Archidiacono
Journal:  Genome Res       Date:  2008-06-13       Impact factor: 9.043

7.  A comprehensive molecular cytogenetic analysis of chromosome rearrangements in gibbons.

Authors:  Oronzo Capozzi; Lucia Carbone; Roscoe R Stanyon; Annamaria Marra; Fengtang Yang; Christopher W Whelan; Pieter J de Jong; Mariano Rocchi; Nicoletta Archidiacono
Journal:  Genome Res       Date:  2012-08-14       Impact factor: 9.043

8.  Species-specific shifts in centromere sequence composition are coincident with breakpoint reuse in karyotypically divergent lineages.

Authors:  Kira V Bulazel; Gianni C Ferreri; Mark D B Eldridge; Rachel J O'Neill
Journal:  Genome Biol       Date:  2007       Impact factor: 13.583

9.  Flying lemurs--the 'flying tree shrews'? Molecular cytogenetic evidence for a Scandentia-Dermoptera sister clade.

Authors:  Wenhui Nie; Beiyuan Fu; Patricia C M O'Brien; Jinhuan Wang; Weiting Su; Alongkoad Tanomtong; Vitaly Volobouev; Malcolm A Ferguson-Smith; Fengtang Yang
Journal:  BMC Biol       Date:  2008-05-01       Impact factor: 7.431

10.  Construction, characterization, and chromosomal mapping of a fosmid library of the white-cheeked gibbon (Nomascus leucogenys).

Authors:  Liping Chen; Jianping Ye; Yan Liu; Jinghuan Wang; Weiting Su; Fengtang Yang; Wenhui Nie
Journal:  Genomics Proteomics Bioinformatics       Date:  2007-12       Impact factor: 7.691
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