Literature DB >> 15545427

Geobacillus gargensis sp. nov., a novel thermophile from a hot spring, and the reclassification of Bacillus vulcani as Geobacillus vulcani comb. nov.

Tamara N Nazina1, Elena V Lebedeva1, Andrei B Poltaraus2, Tatyana P Tourova1, Alexandre A Grigoryan1, Diyana Sh Sokolova1, Anatoliy M Lysenko1, George A Osipov3.   

Abstract

A novel thermophilic spore-forming strain, Ga(T), was isolated from the Garga hot spring located in the northern part of the Transbaikal region (Russia). Strain Ga(T) was found to be an aerobic, Gram-positive, rod-shaped, thermophilic (optimum growth temperature is 60-65 degrees C), chemo-organotrophic bacterium that grows on various sugars, carboxylic acids and hydrocarbons. The G+C content of its DNA is 52.9 mol%. The 16S rRNA gene sequence similarity data show that strain Ga(T) is closely related to members of the genus Geobacillus. Relevant chemotaxonomic data (in particular, the major fatty acid profile of strain Ga(T), which includes iso-C15 : 0, iso-C16 : 0 and iso-C17 : 0 acids) support the assignment of this strain to the genus Geobacillus. The physiological, biochemical and DNA-DNA hybridization studies of strain Ga(T) showed that it differs both genotypically and phenotypically from the recognized Geobacillus species. Based on these data, strain Ga(T) belongs to a novel species, Geobacillus gargensis sp. nov. (type strain, Ga(T)=VKM B-2300(T)=DSM 15378(T)). The analysis of the phenotypic characteristics (additional to those given in the original description) of the type strain of Bacillus vulcani (DSM 13174(T)) showed that they are very similar to the major phenotypic characteristics of the genus Geobacillus. The low DNA-DNA reassociation values of strain DSM 13174(T) with various species of this genus (from 38 to 54 %) clearly demonstrate a sufficient genomic distinction of this strain and its taxonomic status as a species. The physiological characteristics, phylogenetic position and DNA-DNA reassociation values of B. vulcani allow this species to be reclassified as Geobacillus vulcani comb. nov. The main properties that differentiate G. vulcani from the other species of the genus are its ability to produce acids from glycerol, lactose and ribose.

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Year:  2004        PMID: 15545427     DOI: 10.1099/ijs.0.02932-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  13 in total

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2.  New Platform for Screening Genetic Libraries at Elevated Temperatures: Biological and Genomic Information and Genetic Tools of Geobacillus thermodenitrificans K1041.

Authors:  Kosuke Koyama; Yui Mikawa; Shota Nakagawa; Ryota Kurashiki; Takashi Ohshiro; Hirokazu Suzuki
Journal:  Appl Environ Microbiol       Date:  2022-09-07       Impact factor: 5.005

3.  Draft Genome Sequences of Geobacillus stearothermophilus Strains 22 and 53, Isolated from the Garga Hot Spring in the Barguzin River Valley of the Russian Federation.

Authors:  Aleksey S Rozanov; Maria D Logacheva; Sergey E Peltek
Journal:  Genome Announc       Date:  2014-11-20

4.  Draft Genome Sequence of Geobacillus icigianus Strain G1w1T Isolated from Hot Springs in the Valley of Geysers, Kamchatka (Russian Federation).

Authors:  Alla V Bryanskaya; Aleksey S Rozanov; Maria D Logacheva; Anastasia V Kotenko; Sergey E Peltek
Journal:  Genome Announc       Date:  2014-10-23

5.  Insights into the Geobacillus stearothermophilus species based on phylogenomic principles.

Authors:  S A Burgess; S H Flint; D Lindsay; M P Cox; P J Biggs
Journal:  BMC Microbiol       Date:  2017-06-26       Impact factor: 3.605

6.  Geobacillus zalihae sp. nov., a thermophilic lipolytic bacterium isolated from palm oil mill effluent in Malaysia.

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7.  Complete genome sequence of Geobacillus thermoglucosidasius C56-YS93, a novel biomass degrader isolated from obsidian hot spring in Yellowstone National Park.

Authors:  Phillip J Brumm; Miriam L Land; David A Mead
Journal:  Stand Genomic Sci       Date:  2015-10-05

8.  Complete genome sequences of Geobacillus sp. WCH70, a thermophilic strain isolated from wood compost.

Authors:  Phillip J Brumm; Miriam L Land; David A Mead
Journal:  Stand Genomic Sci       Date:  2016-04-27

9.  Complete genome sequences of Geobacillus sp. Y412MC52, a xylan-degrading strain isolated from obsidian hot spring in Yellowstone National Park.

Authors:  Phillip Brumm; Miriam L Land; Loren J Hauser; Cynthia D Jeffries; Yun-Juan Chang; David A Mead
Journal:  Stand Genomic Sci       Date:  2015-10-19

10.  Effect of Cultural Conditions on Protease Production by a Thermophilic Geobacillus thermoglucosidasius SKF4 Isolated from Sungai Klah Hot Spring Park, Malaysia.

Authors:  Allison D Suleiman; Nor'Aini Abdul Rahman; Hidayat Mohd Yusof; Fairolniza Mohd Shariff; Nur Adeela Yasid
Journal:  Molecules       Date:  2020-06-04       Impact factor: 4.411

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