Literature DB >> 15544800

Regulation of transcriptional silencing in yeast by growth temperature.

Xin Bi1, Qun Yu, Joseph J Sandmeier, Susan Elizondo.   

Abstract

Increasing evidence indicates that transcriptionally silent chromatin structure is dynamic and may change its conformation in response to external or internal stimuli. We show that growth temperature affects all three forms of transcriptional silencing in Saccharomyces cerevisiae. In general, increasing the temperature within the range of 23-37 degrees C strengthens HM and telomeric silencing but reduces rDNA silencing. High temperature (37 degrees C) can suppress the silencing defects of histone H4 mutants. We demonstrate that DNA at the silent HML locus becomes more and more negatively supercoiled as temperature increases in a Sir-dependent manner, which is indicative of enhanced silent chromatin. This enhancement of silent chromatin is not dependent on silencers and therefore does not require de novo assembly of silent chromatin. We also present evidence suggesting that MAP kinase-mediated Sir3p hyperphosphorylation, which plays a role in regulating silencing in response to certain stress conditions, is not involved in high temperature-induced strengthening of silencing. In addition, Pnc1p, a positive regulator of Sir2p activity, plays no role in thermal regulation of silencing. Therefore, growth temperature regulates transcriptional silencing by a novel mechanism.

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Year:  2004        PMID: 15544800     DOI: 10.1016/j.jmb.2004.10.002

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  19 in total

Review 1.  The budding yeast nucleus.

Authors:  Angela Taddei; Heiko Schober; Susan M Gasser
Journal:  Cold Spring Harb Perspect Biol       Date:  2010-06-16       Impact factor: 10.005

2.  The effect of temperature on gene silencing by siRNAs: implications for silencing in the anterior chamber of the eye.

Authors:  Paul Russell; Erin Walsh; WeiPing Chen; Andreas Goldwich; Ernst R Tamm
Journal:  Exp Eye Res       Date:  2006-02-07       Impact factor: 3.467

3.  The functional importance of telomere clustering: global changes in gene expression result from SIR factor dispersion.

Authors:  Angela Taddei; Griet Van Houwe; Shigeki Nagai; Ionas Erb; Erik van Nimwegen; Susan M Gasser
Journal:  Genome Res       Date:  2009-01-29       Impact factor: 9.043

4.  Activation of protein kinase C-mitogen-activated protein kinase signaling in response to inositol starvation triggers Sir2p-dependent telomeric silencing in yeast.

Authors:  Sojin Lee; Maria L Gaspar; Manuel A Aregullin; Stephen A Jesch; Susan A Henry
Journal:  J Biol Chem       Date:  2013-08-13       Impact factor: 5.157

5.  Differential contributions of histone H3 and H4 residues to heterochromatin structure.

Authors:  Qun Yu; Lars Olsen; Xinmin Zhang; Jef D Boeke; Xin Bi
Journal:  Genetics       Date:  2011-03-24       Impact factor: 4.562

6.  Proliferating cell nuclear antigen (PCNA) contributes to the high-order structure and stability of heterochromatin in Saccharomyces cerevisiae.

Authors:  Xin Bi; Yue Ren; Morgan Kath
Journal:  Chromosome Res       Date:  2016-12-16       Impact factor: 5.239

7.  Heat stress-induced Cup9-dependent transcriptional regulation of SIR2.

Authors:  Shyamasree Laskar; Sheeba K; Mrinal K Bhattacharyya; Achuthsankar S Nair; Pawan Dhar; Sunanda Bhattacharyya
Journal:  Mol Cell Biol       Date:  2014-11-10       Impact factor: 4.272

Review 8.  Structure and function in the budding yeast nucleus.

Authors:  Angela Taddei; Susan M Gasser
Journal:  Genetics       Date:  2012-09       Impact factor: 4.562

9.  Saccharomyces cerevisiae linker histone Hho1p functionally interacts with core histone H4 and negatively regulates the establishment of transcriptionally silent chromatin.

Authors:  Qun Yu; Holly Kuzmiak; Yanfei Zou; Lars Olsen; Pierre-Antoine Defossez; Xin Bi
Journal:  J Biol Chem       Date:  2008-11-18       Impact factor: 5.157

10.  Multiple histone modifications in euchromatin promote heterochromatin formation by redundant mechanisms in Saccharomyces cerevisiae.

Authors:  Kitty F Verzijlbergen; Alex W Faber; Iris Je Stulemeijer; Fred van Leeuwen
Journal:  BMC Mol Biol       Date:  2009-07-28       Impact factor: 2.946

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