Literature DB >> 15537640

Spectroscopic and redox properties of a CooA homologue from Carboxydothermus hydrogenoformans.

Sayaka Inagaki1, Chiaki Masuda, Tetsuhiro Akaishi, Hiroshi Nakajima, Shiro Yoshioka, Takehiro Ohta, Biswajit Pal, Teizo Kitagawa, Shigetoshi Aono.   

Abstract

CooA is a CO-sensing transcriptional activator that contains a b-type heme as the active site for sensing its physiological effector, CO. In this study, the spectroscopic and redox properties of a new CooA homologue from Carboxydothermus hydrogenoformans (Ch-CooA) were studied. Spectroscopic and mutagenesis studies revealed that His-82 and the N-terminal alpha-amino group were the axial ligands of the Fe(III) and Fe(II) hemes in Ch-CooA and that the N-terminal alpha-amino group was replaced by CO upon CO binding. Two neutral ligands, His-82 and the N-terminal alpha-amino group, are coordinated to the Fe(III) heme in Ch-CooA, whereas two negatively charged ligands, a thiolate from Cys-75 and the nitrogen atom of the N-terminal Pro, are the axial ligands of the Fe(III) heme in Rr-CooA. The difference in the coordination structure of the Fe(III) heme resulted in a large positive shift of redox potentials of Ch-CooA compared with Rr-CooA. Comparing the properties of Ch-CooA and Rr-CooA demonstrates that the essential elements for CooA function will be: (i) the heme is six-coordinate in the Fe(III), Fe(II), and Fe(II)-CO forms; (ii) the N-terminal is coordinated to the heme as an axial ligand, and (iii) CO replaces the N-terminal bound to the heme upon CO binding.

Entities:  

Mesh:

Substances:

Year:  2004        PMID: 15537640     DOI: 10.1074/jbc.M409884200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  10 in total

1.  Effect of DNA binding on geminate CO recombination kinetics in CO-sensing transcription factor CooA.

Authors:  Abdelkrim Benabbas; Venugopal Karunakaran; Hwan Youn; Thomas L Poulos; Paul M Champion
Journal:  J Biol Chem       Date:  2012-04-28       Impact factor: 5.157

2.  Unexpected NO-dependent DNA binding by the CooA homolog from Carboxydothermus hydrogenoformans.

Authors:  Robert W Clark; Nicholas D Lanz; Andrea J Lee; Robert L Kerby; Gary P Roberts; Judith N Burstyn
Journal:  Proc Natl Acad Sci U S A       Date:  2006-01-12       Impact factor: 11.205

3.  Crystallization and preliminary X-ray analysis of CooA from Carboxydothermus hydrogenoformans.

Authors:  Hirofumi Komori; Kensuke Satomoto; Yasufumi Ueda; Naoki Shibata; Sayaka Inagaki; Shiro Yoshioka; Shigetoshi Aono; Yoshiki Higuchi
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2006-04-21

4.  Thiol-disulfide redox dependence of heme binding and heme ligand switching in nuclear hormone receptor rev-erb{beta}.

Authors:  Nirupama Gupta; Stephen W Ragsdale
Journal:  J Biol Chem       Date:  2010-12-01       Impact factor: 5.157

5.  Vibrational coherence spectroscopy of the heme domain in the CO-sensing transcriptional activator CooA.

Authors:  Venugopal Karunakaran; Abdelkrim Benabbas; Hwan Youn; Paul M Champion
Journal:  J Am Chem Soc       Date:  2011-10-28       Impact factor: 15.419

6.  Genomic Analysis of Calderihabitans maritimus KKC1, a Thermophilic, Hydrogenogenic, Carboxydotrophic Bacterium Isolated from Marine Sediment.

Authors:  Kimiho Omae; Yasuko Yoneda; Yuto Fukuyama; Takashi Yoshida; Yoshihiko Sako
Journal:  Appl Environ Microbiol       Date:  2017-07-17       Impact factor: 4.792

7.  Investigations of heme ligation and ligand switching in cytochromes p450 and p420.

Authors:  Yuhan Sun; Weiqiao Zeng; Abdelkrim Benabbas; Xin Ye; Ilia Denisov; Stephen G Sligar; Jing Du; John H Dawson; Paul M Champion
Journal:  Biochemistry       Date:  2013-08-14       Impact factor: 3.162

8.  Heme-based sensing by the mammalian circadian protein CLOCK.

Authors:  Gudrun S Lukat-Rodgers; Cristina Correia; Maria Victoria Botuyan; Georges Mer; Kenton R Rodgers
Journal:  Inorg Chem       Date:  2010-07-19       Impact factor: 5.165

9.  Heme controls the structural rearrangement of its sensor protein mediating the hemolytic bacterial survival.

Authors:  Megumi Nishinaga; Hiroshi Sugimoto; Yudai Nishitani; Seina Nagai; Satoru Nagatoishi; Norifumi Muraki; Takehiko Tosha; Kouhei Tsumoto; Shigetoshi Aono; Yoshitsugu Shiro; Hitomi Sawai
Journal:  Commun Biol       Date:  2021-04-13

10.  The structural basis of gas-responsive transcription by the human nuclear hormone receptor REV-ERBbeta.

Authors:  Keith I Pardee; Xiaohui Xu; Jeff Reinking; Anja Schuetz; Aiping Dong; Suya Liu; Rongguang Zhang; Jens Tiefenbach; Gilles Lajoie; Alexander N Plotnikov; Alexey Botchkarev; Henry M Krause; Aled Edwards
Journal:  PLoS Biol       Date:  2009-02-24       Impact factor: 8.029

  10 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.