Literature DB >> 15531155

Start-up entities in the origin of new genes.

Vincent Daubin1, Howard Ochman.   

Abstract

The remarkable diversity in the contents of genomes raises questions about how new genes and new functions originate. Recent evidence indicates that parasitism, particularly the molecular interactions between phage and their bacterial hosts, is a likely mechanism for generating new genes. This invention of such novel functions seems to be founded on a strategy that secures the short-term survival of parasitic elements and thereby contributes to the renovation of gene repertoires in their host.

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Year:  2004        PMID: 15531155     DOI: 10.1016/j.gde.2004.09.004

Source DB:  PubMed          Journal:  Curr Opin Genet Dev        ISSN: 0959-437X            Impact factor:   5.578


  21 in total

1.  Saltational symbiosis.

Authors:  Jan Sapp
Journal:  Theory Biosci       Date:  2010-05-26       Impact factor: 1.919

Review 2.  Horizontal Gene Transfer and the History of Life.

Authors:  Vincent Daubin; Gergely J Szöllősi
Journal:  Cold Spring Harb Perspect Biol       Date:  2016-04-01       Impact factor: 10.005

3.  Three RNA cells for ribosomal lineages and three DNA viruses to replicate their genomes: a hypothesis for the origin of cellular domain.

Authors:  Patrick Forterre
Journal:  Proc Natl Acad Sci U S A       Date:  2006-02-27       Impact factor: 11.205

Review 4.  Group I introns and inteins: disparate origins but convergent parasitic strategies.

Authors:  Rahul Raghavan; Michael F Minnick
Journal:  J Bacteriol       Date:  2009-08-07       Impact factor: 3.490

5.  Causes for the intriguing presence of tRNAs in phages.

Authors:  Marc Bailly-Bechet; Massimo Vergassola; Eduardo Rocha
Journal:  Genome Res       Date:  2007-09-04       Impact factor: 9.043

6.  The ancient Virus World and evolution of cells.

Authors:  Eugene V Koonin; Tatiana G Senkevich; Valerian V Dolja
Journal:  Biol Direct       Date:  2006-09-19       Impact factor: 4.540

7.  Phylogeny of Banana Streak Virus reveals recent and repetitive endogenization in the genome of its banana host (Musa sp.).

Authors:  Philippe Gayral; Marie-Line Iskra-Caruana
Journal:  J Mol Evol       Date:  2009-06-11       Impact factor: 2.395

8.  Composition bias and the origin of ORFan genes.

Authors:  Inbal Yomtovian; Nuttinee Teerakulkittipong; Byungkook Lee; John Moult; Ron Unger
Journal:  Bioinformatics       Date:  2010-03-15       Impact factor: 6.937

9.  Lateral gene transfer of family A DNA polymerases between thermophilic viruses, aquificae, and apicomplexa.

Authors:  Thomas W Schoenfeld; Senthil K Murugapiran; Jeremy A Dodsworth; Sally Floyd; Michael Lodes; David A Mead; Brian P Hedlund
Journal:  Mol Biol Evol       Date:  2013-04-22       Impact factor: 16.240

10.  Assembly of viral metagenomes from yellowstone hot springs.

Authors:  Thomas Schoenfeld; Melodee Patterson; Paul M Richardson; K Eric Wommack; Mark Young; David Mead
Journal:  Appl Environ Microbiol       Date:  2008-04-25       Impact factor: 4.792

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