Literature DB >> 15527753

Rendezvous in a membrane: close packing, hydrogen bonding, and the formation of transmembrane helix oligomers.

Dirk Schneider1.   

Abstract

The interaction of transmembrane alpha-helices is promoted by a detailed fit between two helical surfaces, which results in close packing and van der Waals interactions of amino acid side chains between two helices. Recent studies additionally indicate an important role of hydrogen bonding for mediating and stabilizing transmembrane helix-helix interactions. The interplay between close packing and electrostatic interactions in influencing the specificity of helix-helix interactions on the one hand and the stability of an existing interaction on the other hand is still unknown. Here, we suggest that close packing mainly determines the specificity of a helix-helix interaction, whereas hydrogen bonding is important for stabilization of a preformed helix dimer.

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Year:  2004        PMID: 15527753     DOI: 10.1016/j.febslet.2004.10.029

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  13 in total

1.  Driving forces for transmembrane alpha-helix oligomerization.

Authors:  Alex J Sodt; Teresa Head-Gordon
Journal:  Biophys J       Date:  2010-07-07       Impact factor: 4.033

Review 2.  Structure elucidation of dimeric transmembrane domains of bitopic proteins.

Authors:  Eduard V Bocharov; Pavel E Volynsky; Konstantin V Pavlov; Roman G Efremov; Alexander S Arseniev
Journal:  Cell Adh Migr       Date:  2010-05-01       Impact factor: 3.405

3.  Complete predicted three-dimensional structure of the facilitator transmembrane protein and hepatitis C virus receptor CD81: conserved and variable structural domains in the tetraspanin superfamily.

Authors:  Michel Seigneuret
Journal:  Biophys J       Date:  2006-01-01       Impact factor: 4.033

4.  Protein folding in membranes: insights from neutron diffraction studies of a membrane beta-sheet oligomer.

Authors:  Xue Han; Kalina Hristova; William C Wimley
Journal:  Biophys J       Date:  2007-09-14       Impact factor: 4.033

5.  Application of the Wang-Landau algorithm to the dimerization of glycophorin A.

Authors:  Claire Gervais; Thomas Wüst; D P Landau; Ying Xu
Journal:  J Chem Phys       Date:  2009-06-07       Impact factor: 3.488

Review 6.  Interaction and conformational dynamics of membrane-spanning protein helices.

Authors:  Dieter Langosch; Isaiah T Arkin
Journal:  Protein Sci       Date:  2009-07       Impact factor: 6.725

7.  A critical GxxxA motif in the gamma6 calcium channel subunit mediates its inhibitory effect on Cav3.1 calcium current.

Authors:  Zuojun Lin; Katja Witschas; Thomas Garcia; Ren-Shiang Chen; Jared P Hansen; Zachary M Sellers; Elza Kuzmenkina; Stefan Herzig; Philip M Best
Journal:  J Physiol       Date:  2008-09-25       Impact factor: 5.182

8.  A topological and conformational stability alphabet for multipass membrane proteins.

Authors:  Xiang Feng; Patrick Barth
Journal:  Nat Chem Biol       Date:  2016-01-18       Impact factor: 15.040

9.  Transmembrane helical domain of the cannabinoid CB1 receptor.

Authors:  Joong-Youn Shim
Journal:  Biophys J       Date:  2009-04-22       Impact factor: 4.033

Review 10.  Viral miniproteins.

Authors:  Daniel DiMaio
Journal:  Annu Rev Microbiol       Date:  2014-04-10       Impact factor: 15.500

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