Literature DB >> 15524547

Self-organized pattern formation in motor-microtubule mixtures.

Sumithra Sankararaman1, Gautam I Menon, P B Sunil Kumar.   

Abstract

We model the stable self-organized patterns obtained in the nonequilibrium steady states of mixtures of molecular motors and microtubules. In experiments [Nédélec et al., Nature (London) 389, 305 (1997); Surrey et al., Science 292, 1167 (2001)] performed in a quasi-two-dimensional geometry, microtubules are oriented by complexes of motor proteins. This interaction yields a variety of patterns, including arrangements of asters, vortices, and disordered configurations. We model this system via a two-dimensional vector field describing the local coarse-grained microtubule orientation and two scalar density fields associated to molecular motors. These scalar fields describe motors which either attach to and move along microtubules or diffuse freely within the solvent. Transitions between single aster, spiral, and vortex states are obtained as a consequence of confinement, as parameters in our model are varied. For systems in which the effects of confinement can be neglected, we present a map of nonequilibrium steady states, which includes arrangements of asters and vortices separately as well as aster-vortex mixtures and fully disordered states. We calculate the steady state distribution of bound and free motors in aster and vortex configurations of microtubules and compare these to our simulation results, providing qualitative arguments for the stability of different patterns in various regimes of parameter space. We study the role of crowding or "saturation" effects on the density profiles of motors in asters, discussing the role of such effects in stabilizing single asters. We also comment on the implications of our results for experiments.

Entities:  

Mesh:

Substances:

Year:  2004        PMID: 15524547     DOI: 10.1103/PhysRevE.70.031905

Source DB:  PubMed          Journal:  Phys Rev E Stat Nonlin Soft Matter Phys        ISSN: 1539-3755


  9 in total

1.  Self-organized cell motility from motor-filament interactions.

Authors:  XinXin Du; Konstantin Doubrovinski; Miriam Osterfield
Journal:  Biophys J       Date:  2012-04-18       Impact factor: 4.033

Review 2.  Approaches to semi-synthetic minimal cells: a review.

Authors:  Pier Luigi Luisi; Francesca Ferri; Pasquale Stano
Journal:  Naturwissenschaften       Date:  2006-01

3.  Generic theory of active polar gels: a paradigm for cytoskeletal dynamics.

Authors:  K Kruse; J F Joanny; F Jülicher; J Prost; K Sekimoto
Journal:  Eur Phys J E Soft Matter       Date:  2005-01-31       Impact factor: 1.890

4.  A Lattice-Boltzmann model for suspensions of self-propelling colloidal particles.

Authors:  S Ramachandran; P B Sunil Kumar; I Pagonabarraga
Journal:  Eur Phys J E Soft Matter       Date:  2006-06-16       Impact factor: 1.890

5.  Dynamics of membranes driven by actin polymerization.

Authors:  Nir S Gov; Ajay Gopinathan
Journal:  Biophys J       Date:  2005-10-20       Impact factor: 4.033

6.  Dynamics and mechanics of motor-filament systems.

Authors:  K Kruse; F Jülicher
Journal:  Eur Phys J E Soft Matter       Date:  2006-09-05       Impact factor: 1.890

7.  Active multistage coarsening of actin networks driven by myosin motors.

Authors:  Marina Soares e Silva; Martin Depken; Björn Stuhrmann; Marijn Korsten; Fred C MacKintosh; Gijsje H Koenderink
Journal:  Proc Natl Acad Sci U S A       Date:  2011-05-18       Impact factor: 11.205

8.  Multiscale modeling and simulation of microtubule-motor-protein assemblies.

Authors:  Tong Gao; Robert Blackwell; Matthew A Glaser; M D Betterton; Michael J Shelley
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2015-12-10

9.  Spontaneous Formation of a Globally Connected Contractile Network in a Microtubule-Motor System.

Authors:  Takayuki Torisawa; Daisuke Taniguchi; Shuji Ishihara; Kazuhiro Oiwa
Journal:  Biophys J       Date:  2016-07-26       Impact factor: 4.033

  9 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.