Literature DB >> 15516119

Simultaneously monitoring gene expression kinetics and genetic noise in single cells by optical well arrays.

Yina Kuang1, Israel Biran, David R Walt.   

Abstract

An optical fiber based well array platform was used for simultaneous, dynamic gene expression monitoring from hundreds of individual live Escherichia coli cells carrying promoter-fluorescent reporter gene fusions. High information content about gene expression kinetics and cell-to-cell gene expression variability can be collected from a single experiment. These data are invaluable for investigating gene regulation and gene networks as well as for systems biology applications.

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Year:  2004        PMID: 15516119     DOI: 10.1021/ac049053f

Source DB:  PubMed          Journal:  Anal Chem        ISSN: 0003-2700            Impact factor:   6.986


  15 in total

Review 1.  The role of physiological heterogeneity in microbial population behavior.

Authors:  Mary E Lidstrom; Michael C Konopka
Journal:  Nat Chem Biol       Date:  2010-09-17       Impact factor: 15.040

2.  Cell-to-cell heterogeneity in growth rate and gene expression in Methylobacterium extorquens AM1.

Authors:  Tim J Strovas; Linda M Sauter; Xiaofeng Guo; Mary E Lidstrom
Journal:  J Bacteriol       Date:  2007-07-20       Impact factor: 3.490

3.  A microfluidic platform for real-time and in situ monitoring of virus infection process.

Authors:  Na Xu; Zhen-Feng Zhang; Li Wang; Bo Gao; Dai-Wen Pang; Han-Zhong Wang; Zhi-Ling Zhang
Journal:  Biomicrofluidics       Date:  2012-09-27       Impact factor: 2.800

4.  Single cell time-resolved quorum responses reveal dependence on cell density and configuration.

Authors:  Ragnhild D Whitaker; Steven Pember; Byron C Wallace; Carla E Brodley; David R Walt
Journal:  J Biol Chem       Date:  2011-04-28       Impact factor: 5.157

5.  Note: Toward multiple addressable optical trapping.

Authors:  Alexei R Faustov; Michael R Webb; David R Walt
Journal:  Rev Sci Instrum       Date:  2010-02       Impact factor: 1.523

6.  Microfluidic Device for Capture and Isolation of Single Cells.

Authors:  Alexander P Hsiao; Kristopher D Barbee; Xiaohua Huang
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2010-08-01

Review 7.  Determining biological noise via single cell analysis.

Authors:  Edgar A Arriaga
Journal:  Anal Bioanal Chem       Date:  2008-10-29       Impact factor: 4.142

8.  Population heterogeneity in Methylobacterium extorquens AM1.

Authors:  Tim J Strovas; Mary E Lidstrom
Journal:  Microbiology (Reading)       Date:  2009-04-21       Impact factor: 2.777

9.  Antibody selection for immobilizing living bacteria.

Authors:  Zhiyong Suo; Xinghong Yang; Recep Avci; Muhammedin Deliorman; Paul Rugheimer; David W Pascual; Yves Idzerda
Journal:  Anal Chem       Date:  2009-09-15       Impact factor: 6.986

10.  Practical, microfabrication-free device for single-cell isolation.

Authors:  Liang-I Lin; Shih-Hui Chao; Deirdre R Meldrum
Journal:  PLoS One       Date:  2009-08-21       Impact factor: 3.240

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