Literature DB >> 15502302

Radiation-damage-induced phasing with anomalous scattering: substructure solution and phasing.

Petrus H Zwart1, Sankaran Banumathi, Miroslawa Dauter, Zbigniew Dauter.   

Abstract

Substructure-solution and phasing procedures using a combination of anomalous scattering and radiation-damage-induced isomorphous differences have been investigated. The tyrosine residues in thaumatin were iodinated with N-iodosuccinimide in the crystalline form as well as prior to crystallization. Several data sets were collected from both forms and used for substructure solution and phasing using various protocols, employing anomalous, isomorphous or both these signals. It was shown that combination of the anomalous and isomorphous signals in the form of the RIPAS (radiation-damage-induced phasing with anomalous scattering) strategy is beneficial for both locating the substructure and subsequent phasing.

Entities:  

Mesh:

Substances:

Year:  2004        PMID: 15502302     DOI: 10.1107/S0907444904021730

Source DB:  PubMed          Journal:  Acta Crystallogr D Biol Crystallogr        ISSN: 0907-4449


  14 in total

1.  XANES measurements of the rate of radiation damage to selenomethionine side chains.

Authors:  James M Holton
Journal:  J Synchrotron Radiat       Date:  2006-12-15       Impact factor: 2.616

2.  Objective evaluation of radiation damage in a nucleoprotein complex.

Authors:  Zbigniew Dauter
Journal:  Acta Crystallogr D Struct Biol       Date:  2016-04-28       Impact factor: 7.652

3.  Structural insights into the molecular mechanisms of cauliflower mosaic virus transmission by its insect vector.

Authors:  François Hoh; Marilyne Uzest; Martin Drucker; Célia Plisson-Chastang; Patrick Bron; Stéphane Blanc; Christian Dumas
Journal:  J Virol       Date:  2010-02-24       Impact factor: 5.103

4.  'Broken symmetries' in macromolecular crystallography: phasing from unmerged data.

Authors:  Marc Schiltz; Gérard Bricogne
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-03-24

5.  Radiation damage in macromolecular crystallography: what is it and why should we care?

Authors:  Elspeth F Garman
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-03-24

6.  Diffraction data analysis in the presence of radiation damage.

Authors:  Dominika Borek; Marcin Cymborowski; Mischa Machius; Wladek Minor; Zbyszek Otwinowski
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-03-24

7.  Impact of synchrotron radiation on macromolecular crystallography: a personal view.

Authors:  Zbigniew Dauter; Mariusz Jaskolski; Alexander Wlodawer
Journal:  J Synchrotron Radiat       Date:  2010-05-14       Impact factor: 2.616

8.  Additional phase information from UV damage of selenomethionine labelled proteins.

Authors:  Daniele de Sanctis; Paul A Tucker; Santosh Panjikar
Journal:  J Synchrotron Radiat       Date:  2011-03-11       Impact factor: 2.616

Review 9.  A beginner's guide to radiation damage.

Authors:  James M Holton
Journal:  J Synchrotron Radiat       Date:  2009-02-25       Impact factor: 2.616

10.  Combining crystallography and EPR: crystal and solution structures of the multidomain cochaperone DnaJ.

Authors:  Thomas R M Barends; Richard W W Brosi; Andrea Steinmetz; Anna Scherer; Elisabeth Hartmann; Jessica Eschenbach; Thorsten Lorenz; Ralf Seidel; Robert L Shoeman; Sabine Zimmermann; Robert Bittl; Ilme Schlichting; Jochen Reinstein
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2013-07-19
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.