Literature DB >> 15491629

Sensitivity and variability of visual scoring in the comet assay. Results of an inter-laboratory scoring exercise with the use of silver staining.

Omar García1, Tania Mandina, Ana I Lamadrid, Adriana Diaz, Antonia Remigio, Yanela Gonzalez, Janet Piloto, Jorge E Gonzalez, Aimeé Alvarez.   

Abstract

Nineteen scorers from seven Cuban laboratories participated in this slide exercise designed to test the influence of the scorer on the accuracy, sensitivity and variability of the comet assay when a visual method of DNA damage evaluation is used. The assay was performed using human lymphocytes from a single donor exposed in vitro for 5 min at 0 degrees C to doses of 0, 5, 10, 25, 50, 100 and 200 microM of hydrogen peroxide. Each participant scored the same set of 14 coded slides with silver stained comets. The comets were classified visually into five categories according to the appearance resulting from the relative proportion of DNA in the tail. The extent of DNA damage was expressed in arbitrary units. At zero dose the median values of 12 scorers out of 19 were included between the values of the overall 25 and 75 per thousand. This proportion remains practically the same as the dose increases. The lowest dose detected by this method for the majority of scorers (11) was 10 microM. The coefficient of variation at the control dose was the highest (median value 26%), progressively declined to 20%, and starting from 25 microM, values are around 10%. The results of the exercise show the reliability of the silver staining and visual scoring for the comet method.

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Year:  2004        PMID: 15491629     DOI: 10.1016/j.mrfmmm.2004.06.035

Source DB:  PubMed          Journal:  Mutat Res        ISSN: 0027-5107            Impact factor:   2.433


  17 in total

1.  Single-cell microarray enables high-throughput evaluation of DNA double-strand breaks and DNA repair inhibitors.

Authors:  David M Weingeist; Jing Ge; David K Wood; James T Mutamba; Qiuying Huang; Elizabeth A Rowland; Michael B Yaffe; Scott Floyd; Bevin P Engelward
Journal:  Cell Cycle       Date:  2013-02-19       Impact factor: 4.534

2.  Glycerol monolaurate nanocapsules for biomedical applications: in vitro toxicological studies.

Authors:  Leonardo Quintana Soares Lopes; Pablo Sebastian Britto de Oliveira; Walter Paixão de Souza Filho; Rodrigo de Almeida Vaucher; Janice Luehring Giongo; Michele Rorato Sagrillo; Roberto Christ Vianna Santos
Journal:  Naunyn Schmiedebergs Arch Pharmacol       Date:  2019-05-11       Impact factor: 3.000

3.  Peripheral mononuclear leukocyte DNA damage, plasma prolidase activity, and oxidative status in patients with benign prostatic hyperplasia.

Authors:  Ilhan Gecit; Ismail Meral; Mehmet Aslan; Abdurrahim Kocyigit; Hakim Celik; Abdullah Taskın; Mehmet Kaba; Necip Pirincci; Mustafa Gunes; Kerem Taken; Halit Demir; Mehmet Uyuklu; Kadir Ceylan
Journal:  Redox Rep       Date:  2014-12-31       Impact factor: 4.412

4.  Assessment of sperm quality in palaemonid prawns using Comet assay: methodological optimization.

Authors:  Alexandre Erraud; Marc Bonnard; Aurélie Duflot; Alain Geffard; Jean-Michel Danger; Joëlle Forget-Leray; Benoît Xuereb
Journal:  Environ Sci Pollut Res Int       Date:  2017-03-22       Impact factor: 4.223

Review 5.  Emerging metrology for high-throughput nanomaterial genotoxicology.

Authors:  Bryant C Nelson; Christa W Wright; Yuko Ibuki; Maria Moreno-Villanueva; Hanna L Karlsson; Giel Hendriks; Christopher M Sims; Neenu Singh; Shareen H Doak
Journal:  Mutagenesis       Date:  2016-08-26       Impact factor: 3.000

6.  Jaundice, phototherapy and DNA damage in full-term neonates.

Authors:  N Ramy; E A Ghany; W Alsharany; A Nada; R K Darwish; W A Rabie; H Aly
Journal:  J Perinatol       Date:  2015-11-19       Impact factor: 2.521

7.  Estimates of DNA strand breakage in bottlenose dolphin (Tursiops truncatus) leukocytes measured with the Comet and DNA diffusion assays.

Authors:  Adriana Díaz; Sandra Carro; Livia Santiago; Juan Estévez; Celia Guevara; Miriam Blanco; Laima Sánchez; Liena Sánchez; Nirka López; Danilo Cruz; Ronar López; Elizabeth B Cuetara; Jorge Luis Fuentes
Journal:  Genet Mol Biol       Date:  2009-03-06       Impact factor: 1.771

8.  High-throughput screening platform for engineered nanoparticle-mediated genotoxicity using CometChip technology.

Authors:  Christa Watson; Jing Ge; Joel Cohen; Georgios Pyrgiotakis; Bevin P Engelward; Philip Demokritou
Journal:  ACS Nano       Date:  2014-03-11       Impact factor: 15.881

9.  Reductive stress after exercise: The issue of redox individuality.

Authors:  N V Margaritelis; A Kyparos; V Paschalis; A A Theodorou; G Panayiotou; A Zafeiridis; K Dipla; M G Nikolaidis; I S Vrabas
Journal:  Redox Biol       Date:  2014-02-19       Impact factor: 11.799

10.  21-Benzylidene digoxin: a proapoptotic cardenolide of cancer cells that up-regulates Na,K-ATPase and epithelial tight junctions.

Authors:  Sayonarah C Rocha; Marco T C Pessoa; Luiza D R Neves; Silmara L G Alves; Luciana M Silva; Herica L Santos; Soraya M F Oliveira; Alex G Taranto; Moacyr Comar; Isabella V Gomes; Fabio V Santos; Natasha Paixão; Luis E M Quintas; François Noël; Antonio F Pereira; Ana C S C Tessis; Natalia L S Gomes; Otacilio C Moreira; Ruth Rincon-Heredia; Fernando P Varotti; Gustavo Blanco; Jose A F P Villar; Rubén G Contreras; Leandro A Barbosa
Journal:  PLoS One       Date:  2014-10-07       Impact factor: 3.240

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