Literature DB >> 15486694

Diversity of guanylate cyclase-activating proteins (GCAPs) in teleost fish: characterization of three novel GCAPs (GCAP4, GCAP5, GCAP7) from zebrafish (Danio rerio) and prediction of eight GCAPs (GCAP1-8) in pufferfish (Fugu rubripes).

Yoshikazu Imanishi1, Lili Yang2, Izabela Sokal1, Slawomir Filipek3, Krzysztof Palczewski1,4,5, Wolfgang Baehr2,6,7.   

Abstract

The guanylate cyclase-activating proteins (GCAPs) are Ca(2+)-binding proteins of the calmodulin (CaM) gene superfamily that function in the regulation of photoreceptor guanylate cyclases (GCs). In the mammalian retina, two GCAPs (GCAP 1-2) and two transmembrane GCs have been identified as part of a complex regulatory system responsive to fluctuating levels of free Ca(2+). A third GCAP, GCAP3, is expressed in human and zebrafish (Danio rerio) retinas, and a guanylate cyclase-inhibitory protein (GCIP) has been shown to be present in frog cones. To explore the diversity of GCAPs in more detail, we searched the pufferfish (Fugu rubripes) and zebrafish (Danio rerio) genomes for GCAP-related gene sequences (fuGCAPs and zGCAPs, respectively) and found that at least five additional GCAPs (GCAP4-8) are predicted to be present in these species. We identified genomic contigs encoding fuGCAPl-8, fuGCIP, zGCAPl-5, zGCAP7 and zGCIP. We describe cloning, expression and localization of three novel GCAPs present in the zebrafish retina (zGCAP4, zGCAP5, and zGCAP7). The results show that recombinant zGCAP4 stimulated bovine rod outer segment GC in a Ca(2+)-dependent manner. RT-PCR with zGCAP specific primers showed specific expression of zGCAPs and zGCIP in the retina, while zGCAPl mRNA is also present in the brain. In situ hybridization with anti-sense zGCAP4, zGCAP5 and zGCAP7 RNA showed exclusive expression in zebrafish cone photoreceptors. The presence of at least eight GCAP genes suggests an unexpected diversity within this subfamily of Ca(2+)-binding proteins in the teleost retina, and suggests additional functions for GCAPs apart from stimulation of GC. Based on genome searches and EST analyses, the mouse and human genomes do not harbor GCAP4-8 or GCIP genes.

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Year:  2004        PMID: 15486694      PMCID: PMC1351297          DOI: 10.1007/s00239-004-2614-y

Source DB:  PubMed          Journal:  J Mol Evol        ISSN: 0022-2844            Impact factor:   2.395


  62 in total

Review 1.  Ca(2+)-binding proteins in the retina: structure, function, and the etiology of human visual diseases.

Authors:  K Palczewski; A S Polans; W Baehr; J B Ames
Journal:  Bioessays       Date:  2000-04       Impact factor: 4.345

Review 2.  Harnessing the power of forward genetics--analysis of neuronal diversity and patterning in the zebrafish retina.

Authors:  J Malicki
Journal:  Trends Neurosci       Date:  2000-11       Impact factor: 13.837

3.  A cis-regulatory element essential for photoreceptor cell-specific expression of a medaka retinal guanylyl cyclase gene.

Authors:  T Kusakabe; N Suzuki
Journal:  Dev Genes Evol       Date:  2001-03       Impact factor: 0.900

Review 4.  Confronting complexity: the interlink of phototransduction and retinoid metabolism in the vertebrate retina.

Authors:  J K McBee; K Palczewski; W Baehr; D R Pepperberg
Journal:  Prog Retin Eye Res       Date:  2001-07       Impact factor: 21.198

5.  T-Coffee: A novel method for fast and accurate multiple sequence alignment.

Authors:  C Notredame; D G Higgins; J Heringa
Journal:  J Mol Biol       Date:  2000-09-08       Impact factor: 5.469

6.  Functional reconstitution of photoreceptor guanylate cyclase with native and mutant forms of guanylate cyclase-activating protein 1.

Authors:  A Otto-Bruc; J Buczylko; I Surgucheva; I Subbaraya; M Rudnicka-Nawrot; J W Crabb; A Arendt; P A Hargrave; W Baehr; K Palczewski
Journal:  Biochemistry       Date:  1997-04-08       Impact factor: 3.162

7.  Ca(2+)-binding proteins in the retina: from discovery to etiology of human disease(1).

Authors:  I Sokal; N Li; C L Verlinde; F Haeseleer; W Baehr; K Palczewski
Journal:  Biochim Biophys Acta       Date:  2000-12-20

8.  The murine cone photoreceptor: a single cone type expresses both S and M opsins with retinal spatial patterning.

Authors:  M L Applebury; M P Antoch; L C Baxter; L L Chun; J D Falk; F Farhangfar; K Kage; M G Krzystolik; L A Lyass; J T Robbins
Journal:  Neuron       Date:  2000-09       Impact factor: 17.173

9.  The destabilization of human GCAP1 by a proline to leucine mutation might cause cone-rod dystrophy.

Authors:  R J Newbold; E C Deery; C E Walker; S E Wilkie; N Srinivasan; D M Hunt; S S Bhattacharya; M J Warren
Journal:  Hum Mol Genet       Date:  2001-01-01       Impact factor: 6.150

10.  Mechanisms of photoreceptor cell death in cancer-associated retinopathy.

Authors:  T Maeda; A Maeda; I Maruyama; K I Ogawa ; Y Kuroki; H Sahara; N Sato; H Ohguro
Journal:  Invest Ophthalmol Vis Sci       Date:  2001-03       Impact factor: 4.799

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  62 in total

1.  The function of guanylate cyclase 1 and guanylate cyclase 2 in rod and cone photoreceptors.

Authors:  Wolfgang Baehr; Sukanya Karan; Tadao Maeda; Dong-Gen Luo; Sha Li; J Darin Bronson; Carl B Watt; King-Wai Yau; Jeanne M Frederick; Krzysztof Palczewski
Journal:  J Biol Chem       Date:  2007-01-25       Impact factor: 5.157

2.  The crystal structure of GCAP3 suggests molecular mechanism of GCAP-linked cone dystrophies.

Authors:  Ricardo Stephen; Krzysztof Palczewski; Marcelo C Sousa
Journal:  J Mol Biol       Date:  2006-04-03       Impact factor: 5.469

3.  Interphotoreceptor retinoid-binding protein gene structure in tetrapods and teleost fish.

Authors:  John M Nickerson; Ruth A Frey; Vincent T Ciavatta; Deborah L Stenkamp
Journal:  Mol Vis       Date:  2006-12-09       Impact factor: 2.367

4.  Stabilizing function for myristoyl group revealed by the crystal structure of a neuronal calcium sensor, guanylate cyclase-activating protein 1.

Authors:  Ricardo Stephen; Grzegorz Bereta; Marcin Golczak; Krzysztof Palczewski; Marcelo Carlos Sousa
Journal:  Structure       Date:  2007-11       Impact factor: 5.006

5.  A G86R mutation in the calcium-sensor protein GCAP1 alters regulation of retinal guanylyl cyclase and causes dominant cone-rod degeneration.

Authors:  Igor V Peshenko; Artur V Cideciyan; Alexander Sumaroka; Elena V Olshevskaya; Alexander Scholten; Seher Abbas; Karl-Wilhelm Koch; Samuel G Jacobson; Alexander M Dizhoor
Journal:  J Biol Chem       Date:  2019-01-08       Impact factor: 5.157

6.  High cGMP synthetic activity in carp cones.

Authors:  Norihiko Takemoto; Shuji Tachibanaki; Satoru Kawamura
Journal:  Proc Natl Acad Sci U S A       Date:  2009-06-25       Impact factor: 11.205

Review 7.  Evolution of vertebrate rod and cone phototransduction genes.

Authors:  Dan Larhammar; Karin Nordström; Tomas A Larsson
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2009-10-12       Impact factor: 6.237

8.  Bicarbonate Modulates Photoreceptor Guanylate Cyclase (ROS-GC) Catalytic Activity.

Authors:  Teresa Duda; Xiao-Hong Wen; Tomoki Isayama; Rameshwar K Sharma; Clint L Makino
Journal:  J Biol Chem       Date:  2015-03-12       Impact factor: 5.157

9.  Effects of Ca2+, Mg2+, and myristoylation on guanylyl cyclase activating protein 1 structure and stability.

Authors:  Sunghyuk Lim; Igor Peshenko; Alexander Dizhoor; James B Ames
Journal:  Biochemistry       Date:  2009-02-10       Impact factor: 3.162

Review 10.  Mg2+/Ca2+ cation binding cycle of guanylyl cyclase activating proteins (GCAPs): role in regulation of photoreceptor guanylyl cyclase.

Authors:  Alexander M Dizhoor; Elena V Olshevskaya; Igor V Peshenko
Journal:  Mol Cell Biochem       Date:  2009-12-02       Impact factor: 3.396

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