Literature DB >> 15483128

Tyrosine residues that control binding and gating in the 5-hydroxytryptamine3 receptor revealed by unnatural amino acid mutagenesis.

Darren L Beene1, Kerry L Price, Henry A Lester, Dennis A Dougherty, Sarah C R Lummis.   

Abstract

The mechanism by which agonist binding triggers pore opening in ligand-gated ion channels is poorly understood. Here, we used unnatural amino acid mutagenesis to introduce subtle changes to the side chains of tyrosine residues (Tyr141, Tyr143, Tyr153, and Tyr234), which dominate the 5-HT3 receptor binding site. Heterologous expression in oocytes, combined with radioligand binding data and a model of 5-HT (serotonin) computationally docked into the binding site, has allowed us to determine which of these residues are responsible for binding and/or gating. We have shown that Tyr 143 forms a hydrogen bond that is essential for receptor gating but does not affect binding, whereas a hydrogen bond formed by Tyr153 is involved in both binding and gating of the receptor. The aromatic group of Tyr234 is essential for binding and gating, whereas its hydroxyl does not affect binding but plays a steric role in receptor gating. Tyr141 is not involved in agonist binding or receptor gating but is important for antagonist interactions. These data, combined with a new model of the nonliganded 5-HT3 receptor, lead to a mechanistic explanation of the interactions that initiate the conformational change leading to channel opening. Thus, we suggest that agonist entry into the binding pocket may displace Tyr143 and Tyr153 and results in their forming new hydrogen bonds. These bonds may form part of the network of bond rearrangements that trigger the conformational change leading to channel opening. Similar rearrangements may initiate gating in all Cys-loop receptors.

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Year:  2004        PMID: 15483128      PMCID: PMC6730062          DOI: 10.1523/JNEUROSCI.2429-04.2004

Source DB:  PubMed          Journal:  J Neurosci        ISSN: 0270-6474            Impact factor:   6.167


  27 in total

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4.  Crystal structure of an ACh-binding protein reveals the ligand-binding domain of nicotinic receptors.

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5.  Activation of the nicotinic acetylcholine receptor involves a switch in conformation of the alpha subunits.

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6.  Structure and dynamics of the GABA binding pocket: A narrowing cleft that constricts during activation.

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Review 8.  Anxiety over GABA(A) receptor structure relieved by AChBP.

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9.  Structural model of nicotinic acetylcholine receptor isotypes bound to acetylcholine and nicotine.

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Journal:  BMC Struct Biol       Date:  2002-01-18

10.  Identification of critical residues in loop E in the 5-HT3ASR binding site.

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  38 in total

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Authors:  Stephan A Pless; Robin Y Kim; Christopher A Ahern; Harley T Kurata
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Authors:  A J Thompson; P-L Chau; S L Chan; S C R Lummis
Journal:  Biophys J       Date:  2005-12-30       Impact factor: 4.033

3.  Unnatural amino acid mutagenesis of the GABA(A) receptor binding site residues reveals a novel cation-pi interaction between GABA and beta 2Tyr97.

Authors:  Claire L Padgett; Ariele P Hanek; Henry A Lester; Dennis A Dougherty; Sarah C R Lummis
Journal:  J Neurosci       Date:  2007-01-24       Impact factor: 6.167

Review 4.  Gating mechanisms in Cys-loop receptors.

Authors:  Jennie M E Cederholm; Peter R Schofield; Trevor M Lewis
Journal:  Eur Biophys J       Date:  2009-04-29       Impact factor: 1.733

5.  A cation-π interaction at a phenylalanine residue in the glycine receptor binding site is conserved for different agonists.

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6.  Unraveling mechanisms underlying partial agonism in 5-HT3A receptors.

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Review 7.  Incorporation of Non-Canonical Amino Acids.

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Review 8.  5-HT3 receptors.

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Review 9.  High throughput electrophysiology with Xenopus oocytes.

Authors:  Roger L Papke; Cathy Smith-Maxwell
Journal:  Comb Chem High Throughput Screen       Date:  2009-01       Impact factor: 1.339

10.  Molecular characterization of agonists that bind to an insect GABA receptor.

Authors:  Ian McGonigle; Sarah C R Lummis
Journal:  Biochemistry       Date:  2010-04-06       Impact factor: 3.162

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