Literature DB >> 15477592

Codon-specific translational defect caused by a wobble modification deficiency in mutant tRNA from a human mitochondrial disease.

Yohei Kirino1, Takehiro Yasukawa, Shigeo Ohta, Shigeo Akira, Kaisuke Ishihara, Kimitsuna Watanabe, Tsutomu Suzuki.   

Abstract

Point mutations in the mitochondrial (mt) tRNA(Leu(UUR)) gene are responsible for mitochondrial myopathy, encephalopathy, lactic acidosis, and stroke-like episodes (MELAS), a subgroup of mitochondrial encephalomyopathic diseases. We previously showed that mt tRNA(Leu(UUR)) with an A3243G or T3271C mutation derived from patients with MELAS are deficient in a normal taurine-containing modification (taum5U; 5-taurinomethyluridine) at the anticodon wobble position. To examine decoding disorder of the mutant tRNA due to the wobble modification deficiency independent of the pathogenic point mutation itself, we used a molecular surgery technique to construct an mt tRNA(Leu(UUR)) molecule lacking the taurine modification but without the pathogenic mutation. This "operated" mt tRNA(Leu(UUR)) without the taurine modification showed severely reduced UUG translation but no decrease in UUA translation. We thus concluded that the UUG codon-specific translational defect of the mutant mt tRNAs(Leu(UUR)) is the primary cause of MELAS at the molecular level. This result could explain the complex I deficiency observed clinically in MELAS.

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Year:  2004        PMID: 15477592      PMCID: PMC524061          DOI: 10.1073/pnas.0405173101

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  49 in total

1.  Translation ability of mitochondrial tRNAsSer with unusual secondary structures in an in vitro translation system of bovine mitochondria.

Authors:  T Hanada; T Suzuki; T Yokogawa; C Takemoto-Hori; M Sprinzl; K Watanabe
Journal:  Genes Cells       Date:  2001-12       Impact factor: 1.891

2.  Wobble modification differences and subcellular localization of tRNAs in Leishmania tarentolae: implication for tRNA sorting mechanism.

Authors:  Tomonori Kaneko; Takeo Suzuki; Stephen T Kapushoc; Mary Anne Rubio; Jafar Ghazvini; Kimitsuna Watanabe; Larry Simpson; Tsutomu Suzuki
Journal:  EMBO J       Date:  2003-02-03       Impact factor: 11.598

3.  Impairment of mitochondrial transcription termination by a point mutation associated with the MELAS subgroup of mitochondrial encephalomyopathies.

Authors:  J F Hess; M A Parisi; J L Bennett; D A Clayton
Journal:  Nature       Date:  1991-05-16       Impact factor: 49.962

4.  Stepwise degradation of polyribonucleotides.

Authors:  G Keith; P T Gilham
Journal:  Biochemistry       Date:  1974-08-13       Impact factor: 3.162

5.  Respiration-deficient cells are caused by a single point mutation in the mitochondrial tRNA-Leu (UUR) gene in mitochondrial myopathy, encephalopathy, lactic acidosis, and strokelike episodes (MELAS).

Authors:  Y Kobayashi; M Y Momoi; K Tominaga; H Shimoizumi; K Nihei; M Yanagisawa; Y Kagawa; S Ohta
Journal:  Am J Hum Genet       Date:  1991-09       Impact factor: 11.025

6.  Identification and characterization of mammalian mitochondrial tRNA nucleotidyltransferases.

Authors:  T Nagaike; T Suzuki; Y Tomari; C Takemoto-Hori; F Negayama; K Watanabe; T Ueda
Journal:  J Biol Chem       Date:  2001-08-14       Impact factor: 5.157

7.  Apparent association constants of tRNAs for the ribosomal A, P, and E sites.

Authors:  S Schilling-Bartetzko; F Franceschi; H Sternbach; K H Nierhaus
Journal:  J Biol Chem       Date:  1992-03-05       Impact factor: 5.157

Review 8.  Decoding the genome: a modified view.

Authors:  Paul F Agris
Journal:  Nucleic Acids Res       Date:  2004-01-09       Impact factor: 16.971

9.  Findings in muscle in complex I (NADH coenzyme Q reductase) deficiency.

Authors:  Y Koga; I Nonaka; M Kobayashi; M Tojyo; K Nihei
Journal:  Ann Neurol       Date:  1988-12       Impact factor: 10.422

10.  Complementation of mutant and wild-type human mitochondrial DNAs coexisting since the mutation event and lack of complementation of DNAs introduced separately into a cell within distinct organelles.

Authors:  M Yoneda; T Miyatake; G Attardi
Journal:  Mol Cell Biol       Date:  1994-04       Impact factor: 4.272

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  85 in total

Review 1.  Hitting the brakes: termination of mitochondrial transcription.

Authors:  Kip E Guja; Miguel Garcia-Diaz
Journal:  Biochim Biophys Acta       Date:  2011-11-25

2.  Taurine-containing uridine modifications in tRNA anticodons are required to decipher non-universal genetic codes in ascidian mitochondria.

Authors:  Takeo Suzuki; Kenjyo Miyauchi; Tsutomu Suzuki; Shin-ichi Yokobori; Naoki Shigi; Akiko Kondow; Nono Takeuchi; Akihiko Yamagishi; Kimitsuna Watanabe
Journal:  J Biol Chem       Date:  2011-08-26       Impact factor: 5.157

3.  Pathogenic mechanism of a human mitochondrial tRNAPhe mutation associated with myoclonic epilepsy with ragged red fibers syndrome.

Authors:  Jiqiang Ling; Hervé Roy; Daoming Qin; Mary Anne T Rubio; Juan D Alfonzo; Kurt Fredrick; Michael Ibba
Journal:  Proc Natl Acad Sci U S A       Date:  2007-09-18       Impact factor: 11.205

4.  Characterization of human GTPBP3, a GTP-binding protein involved in mitochondrial tRNA modification.

Authors:  Magda Villarroya; Silvia Prado; Juan M Esteve; Miguel A Soriano; Carmen Aguado; David Pérez-Martínez; José I Martínez-Ferrandis; Lucía Yim; Victor M Victor; Elvira Cebolla; Asunción Montaner; Erwin Knecht; M-Eugenia Armengod
Journal:  Mol Cell Biol       Date:  2008-10-13       Impact factor: 4.272

Review 5.  Mitochondrial translation and beyond: processes implicated in combined oxidative phosphorylation deficiencies.

Authors:  Paulien Smits; Jan Smeitink; Lambert van den Heuvel
Journal:  J Biomed Biotechnol       Date:  2010-04-13

Review 6.  Physiological roles of taurine in heart and muscle.

Authors:  Stephen W Schaffer; Chian Ju Jong; K C Ramila; Junichi Azuma
Journal:  J Biomed Sci       Date:  2010-08-24       Impact factor: 8.410

7.  Effect of beta-alanine treatment on mitochondrial taurine level and 5-taurinomethyluridine content.

Authors:  Chian Ju Jong; Takashi Ito; Mahmood Mozaffari; Junichi Azuma; Stephen Schaffer
Journal:  J Biomed Sci       Date:  2010-08-24       Impact factor: 8.410

8.  Evolutionarily conserved proteins MnmE and GidA catalyze the formation of two methyluridine derivatives at tRNA wobble positions.

Authors:  Ismaïl Moukadiri; Silvia Prado; Julio Piera; Adrián Velázquez-Campoy; Glenn R Björk; M-Eugenia Armengod
Journal:  Nucleic Acids Res       Date:  2009-11       Impact factor: 16.971

9.  Optimization of the hybridization-based method for purification of thermostable tRNAs in the presence of tetraalkylammonium salts.

Authors:  Takashi Yokogawa; Yusuke Kitamura; Daigo Nakamura; Satoshi Ohno; Kazuya Nishikawa
Journal:  Nucleic Acids Res       Date:  2009-12-29       Impact factor: 16.971

10.  Tertiary network in mammalian mitochondrial tRNAAsp revealed by solution probing and phylogeny.

Authors:  Marie Messmer; Joern Pütz; Takeo Suzuki; Tsutomu Suzuki; Claude Sauter; Marie Sissler; Florentz Catherine
Journal:  Nucleic Acids Res       Date:  2009-09-18       Impact factor: 16.971

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