Literature DB >> 15477231

Statistical recognition of random and regular phyllotactic patterns.

Bernard Jeune1, Denis Barabé.   

Abstract

AIMS: A statistical method used in ecology is adapted to characterize the degree of order in phyllotactic systems. SCOPE: The test consists of subdividing a planar projection of the stem apical meristem into 16 sectors and counting the number of primordia appearing in each. By dividing the sum of squared deviations by the mean number of primordia per sector the chi-square (chi2) is obtained. When there are a total number of 20 primordia, if the chi2 is less than 6.26, the phyllotaxis is spiral; if it is between 6.26 and 27.5 the phyllotaxis is random; and if it is greater than 27.5, the phyllotaxis is distichous or whorled (level of significance alpha = 5 %). It is also possible to remove one or more sectors. If there are k sectors, the two critical values delimiting the random zone will be found in a chi2 table for k - 1 degrees of freedom.
CONCLUSIONS: The method is applied to the analysis of sho mutants described by Itoh et al. in 2000 (Plant Cell 12: 2161-2174). The results obtained are in agreement with the theoretical analysis showing that a whorled or spiral phyllotactic system may contain a certain number of randomly distributed elements without losing its regular global structure.

Mesh:

Year:  2004        PMID: 15477231      PMCID: PMC4242280          DOI: 10.1093/aob/mch213

Source DB:  PubMed          Journal:  Ann Bot        ISSN: 0305-7364            Impact factor:   4.357


  4 in total

1.  Non-independence of individuals in a population of Drosophila melanogaster: effects on spatial distribution and dispersal.

Authors:  A Lefranc; B Jeune; M Thomas-Orillard; E Danchin
Journal:  C R Acad Sci III       Date:  2001-03

2.  Shoot organization genes regulate shoot apical meristem organization and the pattern of leaf primordium initiation in rice.

Authors:  J I Itoh; H Kitano; M Matsuoka; Y Nagato
Journal:  Plant Cell       Date:  2000-11       Impact factor: 11.277

3.  The use of entropy to analyze phyllotactic mutants: a theoretical analysis.

Authors:  Denis Barabé; Bernard Jeune
Journal:  Plant Cell       Date:  2004-04       Impact factor: 11.277

4.  Control of phyllotaxy in maize by the abphyl1 gene.

Authors:  D Jackson; S Hake
Journal:  Development       Date:  1999-01       Impact factor: 6.868

  4 in total
  4 in total

1.  An assessment of morphogenetic fluctuation during reproductive phase change in Arabidopsis.

Authors:  Sylvie Pouteau; Catherine Albertini
Journal:  Ann Bot       Date:  2011-03-01       Impact factor: 4.357

2.  A stochastic multicellular model identifies biological watermarks from disorders in self-organized patterns of phyllotaxis.

Authors:  Yassin Refahi; Géraldine Brunoud; Etienne Farcot; Alain Jean-Marie; Minna Pulkkinen; Teva Vernoux; Christophe Godin
Journal:  Elife       Date:  2016-07-06       Impact factor: 8.140

3.  Noise and robustness in phyllotaxis.

Authors:  Vincent Mirabet; Fabrice Besnard; Teva Vernoux; Arezki Boudaoud
Journal:  PLoS Comput Biol       Date:  2012-02-16       Impact factor: 4.475

4.  Understanding the unique flowering sequence in Dipsacus fullonum: Evidence from geometrical changes during head development.

Authors:  Somayeh Naghiloo; Regine Claßen-Bockhoff
Journal:  PLoS One       Date:  2017-03-22       Impact factor: 3.240

  4 in total

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