Literature DB >> 15475613

Messenger RNA decay in mammalian cells: the exonuclease perspective.

David T Fritz1, Naomi Bergman, Walter J Kilpatrick, Carol J Wilusz, Jeffrey Wilusz.   

Abstract

The majority of messenger RNA (mRNA) decay in mammalian cells appears to be the work of a series of RNA exoribonucleases. A set of multiple poly(A)-specific deadenylases has been identified, some, if not most, of which are likely to play a role in the key first step of mRNA turnover--the regulated shortening of the poly(A) tail. After deadenylation, the transcript likely gets degraded by either a 5'-to-3' or a 3'-to-5' exonucleolytic pathway. Interestingly, multiple exonucleases have been identified for both of these pathways that appear to form multicomponent complexes with diverse roles in cellular biology. Therefore these enzymes appear not only to be important components of the mRNA turnover machinery, but also may function in a networked fashion in the post-transcriptional control of gene expression.

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Year:  2004        PMID: 15475613     DOI: 10.1385/CBB:41:2:265

Source DB:  PubMed          Journal:  Cell Biochem Biophys        ISSN: 1085-9195            Impact factor:   2.194


  10 in total

Review 1.  The role of AUF1 in regulated mRNA decay.

Authors:  Frances M Gratacós; Gary Brewer
Journal:  Wiley Interdiscip Rev RNA       Date:  2010 Nov-Dec       Impact factor: 9.957

2.  Biological role of the two overlapping poly(A)-binding protein interacting motifs 2 (PAM2) of eukaryotic releasing factor eRF3 in mRNA decay.

Authors:  Masanori Osawa; Nao Hosoda; Tamiji Nakanishi; Naoyuki Uchida; Tomomi Kimura; Shunsuke Imai; Asako Machiyama; Toshiaki Katada; Shin-ichi Hoshino; Ichio Shimada
Journal:  RNA       Date:  2012-09-27       Impact factor: 4.942

3.  PolyA-specific ribonuclease (PARN-1) function in stage-specific mRNA turnover in Trypanosoma brucei.

Authors:  Christopher J Utter; Stacey A Garcia; Joseph Milone; Vivian Bellofatto
Journal:  Eukaryot Cell       Date:  2011-07-08

4.  Human TOB, an antiproliferative transcription factor, is a poly(A)-binding protein-dependent positive regulator of cytoplasmic mRNA deadenylation.

Authors:  Nader Ezzeddine; Tsung-Cheng Chang; Wenmiao Zhu; Akio Yamashita; Chyi-Ying A Chen; Zhenping Zhong; Yukiko Yamashita; Dinghai Zheng; Ann-Bin Shyu
Journal:  Mol Cell Biol       Date:  2007-09-04       Impact factor: 4.272

5.  Methodological considerations for gene expression profiling of human brain.

Authors:  Mary Atz; David Walsh; Preston Cartagena; Jun Li; Simon Evans; Prabhakara Choudary; Kevin Overman; Richard Stein; Hiro Tomita; Steven Potkin; Rick Myers; Stanley J Watson; E G Jones; Huda Akil; William E Bunney; Marquis P Vawter
Journal:  J Neurosci Methods       Date:  2007-04-08       Impact factor: 2.390

Review 6.  Viral and Synthetic RNA Vector Technologies and Applications.

Authors:  Juliane W Schott; Michael Morgan; Melanie Galla; Axel Schambach
Journal:  Mol Ther       Date:  2016-07-05       Impact factor: 11.454

7.  UU/UA dinucleotide frequency reduction in coding regions results in increased mRNA stability and protein expression.

Authors:  Maher Al-Saif; Khalid S A Khabar
Journal:  Mol Ther       Date:  2012-03-20       Impact factor: 11.454

8.  A mutation in cnot8, component of the Ccr4-not complex regulating transcript stability, affects expression levels of developmental regulators and reveals a role of Fgf3 in development of caudal hypothalamic dopaminergic neurons.

Authors:  Peter Koch; Heiko B Löhr; Wolfgang Driever
Journal:  PLoS One       Date:  2014-12-05       Impact factor: 3.240

9.  DICER-ARGONAUTE2 complex in continuous fluorogenic assays of RNA interference enzymes.

Authors:  Mark A Bernard; Leyu Wang; Souvenir D Tachado
Journal:  PLoS One       Date:  2015-03-20       Impact factor: 3.240

10.  Moderate Folic Acid Supplementation in Pregnant Mice Results in Altered Sex-Specific Gene Expression in Brain of Young Mice and Embryos.

Authors:  Yan Luan; Marta Cosín-Tomás; Daniel Leclerc; Olga V Malysheva; Marie A Caudill; Rima Rozen
Journal:  Nutrients       Date:  2022-03-02       Impact factor: 5.717

  10 in total

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