Literature DB >> 15475411

Structural and functional diversity in heme monooxygenases.

Thomas L Poulos1.   

Abstract

Recent advances in understanding structure-function relationships in cytochrome P450 (P450), nitric-oxide synthase (NOS), and heme oxygenase are summarized. Of particular importance is the role that dynamics plays in P450 function, where the active site undergoes large open/close motions to enable substrates to bind and products to leave. In sharp contrast, the heme-containing active site of NOS is rigid and remains relatively exposed compared with P450s. This difference in dynamics and active site exposure requires that the O(2) activation machinery operate somewhat differently in P450 and NOS. Owing to the open NOS active site, the NOS-oxy complex could be subject to nonspecific protonation that short-circuits the normal reaction path. One working hypothesis holds that NOS recruited the cofactor, tetrahydrobiopterin, to bind near the heme for very rapid coupled electron/proton transfer to the oxy complex, which avoids indiscriminate reaction with bulk solvent. Despite these differences, P450, NOS, and also heme oxygenase use a very similar network of H-bonded water molecules in the active site that are required for oxygen activation. Both P450 and NOS are important drug targets. With NOS, the structural basis for isoform-selective inhibition by a class of dipeptide inhibitors has been worked out, thus providing the basis for structure-based drug design.

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Year:  2004        PMID: 15475411     DOI: 10.1124/dmd.104.002071

Source DB:  PubMed          Journal:  Drug Metab Dispos        ISSN: 0090-9556            Impact factor:   3.922


  20 in total

1.  Functional importance of a peripheral pocket in mammalian cytochrome P450 2B enzymes.

Authors:  Hyun-Hee Jang; Jingbao Liu; Ga-Young Lee; James R Halpert; P Ross Wilderman
Journal:  Arch Biochem Biophys       Date:  2015-08-28       Impact factor: 4.013

2.  The H93G Myoglobin Cavity Mutant as a Versatile Scaffold for Modeling Heme Iron Coordination Structures in Protein Active Sites and Their Characterization with Magnetic Circular Dichroism Spectroscopy.

Authors:  Jing Du; Masanori Sono; John H Dawson
Journal:  Coord Chem Rev       Date:  2011-04-01       Impact factor: 22.315

3.  The role of cytochrome P450 2B6 and 2B4 substrate access channel residues predicted based on crystal structures of the amlodipine complexes.

Authors:  Hyun-Hee Jang; Dmitri R Davydov; Ga-Young Lee; Chul-Ho Yun; James R Halpert
Journal:  Arch Biochem Biophys       Date:  2014-01-18       Impact factor: 4.013

4.  Investigation by site-directed mutagenesis of the role of cytochrome P450 2B4 non-active-site residues in protein-ligand interactions based on crystal structures of the ligand-bound enzyme.

Authors:  P Ross Wilderman; Sean C Gay; Hyun-Hee Jang; Qinghai Zhang; C David Stout; James R Halpert
Journal:  FEBS J       Date:  2011-11-25       Impact factor: 5.542

Review 5.  Plasticity of CYP2B enzymes: structural and solution biophysical methods.

Authors:  P Ross Wilderman; James R Halpert
Journal:  Curr Drug Metab       Date:  2012-02       Impact factor: 3.731

6.  The proximal hydrogen bond network modulates Bacillus subtilis nitric-oxide synthase electronic and structural properties.

Authors:  Albane Brunel; Adjélé Wilson; Laura Henry; Pierre Dorlet; Jérôme Santolini
Journal:  J Biol Chem       Date:  2011-02-10       Impact factor: 5.157

7.  Functional characterization of cytochromes P450 2B from the desert woodrat Neotoma lepida.

Authors:  P Ross Wilderman; Hyun-Hee Jang; Jael R Malenke; Mariam Salib; Elisabeth Angermeier; Sonia Lamime; M Denise Dearing; James R Halpert
Journal:  Toxicol Appl Pharmacol       Date:  2013-12-19       Impact factor: 4.219

8.  Application of molecular modeling for prediction of substrate specificity in cytochrome P450 1A2 mutants.

Authors:  Youbin Tu; Rahul Deshmukh; Meena Sivaneri; Grazyna D Szklarz
Journal:  Drug Metab Dispos       Date:  2008-08-14       Impact factor: 3.922

9.  Crystal structures of cytochrome P450 2B4 in complex with the inhibitor 1-biphenyl-4-methyl-1H-imidazole: ligand-induced structural response through alpha-helical repositioning.

Authors:  Sean C Gay; Ling Sun; Keiko Maekawa; James R Halpert; C David Stout
Journal:  Biochemistry       Date:  2009-06-09       Impact factor: 3.162

10.  Structural and thermodynamic consequences of 1-(4-chlorophenyl)imidazole binding to cytochrome P450 2B4.

Authors:  Yonghong Zhao; Ling Sun; B K Muralidhara; Santosh Kumar; Mark A White; C David Stout; James R Halpert
Journal:  Biochemistry       Date:  2007-09-22       Impact factor: 3.162

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