Literature DB >> 15475355

Role of the retinal hydrogen bond network in rhodopsin Schiff base stability and hydrolysis.

Jay M Janz1, David L Farrens.   

Abstract

Little is known about the molecular mechanism of Schiff base hydrolysis in rhodopsin. We report here our investigation into this process focusing on the role of amino acids involved in a hydrogen bond network around the retinal Schiff base. We find conservative mutations in this network (T94I, E113Q, S186A, E181Q, Y192F, and Y268F) increase the activation energy (E(a)) and abolish the concave Arrhenius plot normally seen for Schiff base hydrolysis in dark state rhodopsin. Interestingly, two mutants (T94I and E113Q) show dramatically faster rates of Schiff base hydrolysis in dark state rhodopsin, yet slower hydrolysis rates in the active MII form. We find deuterium affects the hydrolysis process in wild-type rhodopsin, exhibiting a specific isotope effect of approximately 2.5, and proton inventory studies indicate that multiple proton transfer events occur during the process of Schiff base hydrolysis for both dark state and MII forms. Taken together, our study demonstrates the importance of the retinal hydrogen bond network both in maintaining Schiff base integrity in dark state rhodopsin, as well as in catalyzing the hydrolysis and release of retinal from the MII form. Finally, we note that the dramatic alteration of Schiff base stability caused by mutation T94I may play a causative role in congenital night blindness as has been suggested by the Oprian and Garriga laboratories.

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Year:  2004        PMID: 15475355     DOI: 10.1074/jbc.M408766200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  30 in total

1.  Effect of channel mutations on the uptake and release of the retinal ligand in opsin.

Authors:  Ronny Piechnick; Eglof Ritter; Peter W Hildebrand; Oliver P Ernst; Patrick Scheerer; Klaus Peter Hofmann; Martin Heck
Journal:  Proc Natl Acad Sci U S A       Date:  2012-03-19       Impact factor: 11.205

2.  Molecular dynamics of rhodopsin and free opsin: computer simulation.

Authors:  Kh T Kholmurodov; T B Fel'dman; M A Ostrovskii
Journal:  Neurosci Behav Physiol       Date:  2007-02

Review 3.  G protein-coupled receptor rhodopsin.

Authors:  Krzysztof Palczewski
Journal:  Annu Rev Biochem       Date:  2006       Impact factor: 23.643

4.  How a small change in retinal leads to G-protein activation: initial events suggested by molecular dynamics calculations.

Authors:  Paul S Crozier; Mark J Stevens; Thomas B Woolf
Journal:  Proteins       Date:  2007-02-15

5.  The photo-Favorskii reaction of p-hydroxyphenacyl compounds is initiated by water-assisted, adiabatic extrusion of a triplet biradical.

Authors:  Richard S Givens; Dominik Heger; Bruno Hellrung; Yavor Kamdzhilov; Marek Mac; Peter G Conrad; Elizabeth Cope; Jong I Lee; Julio F Mata-Segreda; Richard L Schowen; Jakob Wirz
Journal:  J Am Chem Soc       Date:  2008-02-22       Impact factor: 15.419

Review 6.  Microbial and animal rhodopsins: structures, functions, and molecular mechanisms.

Authors:  Oliver P Ernst; David T Lodowski; Marcus Elstner; Peter Hegemann; Leonid S Brown; Hideki Kandori
Journal:  Chem Rev       Date:  2013-12-23       Impact factor: 60.622

7.  Highly conserved tyrosine stabilizes the active state of rhodopsin.

Authors:  Joseph A Goncalves; Kieron South; Shivani Ahuja; Ekaterina Zaitseva; Chikwado A Opefi; Markus Eilers; Reiner Vogel; Philip J Reeves; Steven O Smith
Journal:  Proc Natl Acad Sci U S A       Date:  2010-11-01       Impact factor: 11.205

8.  Evolution of nonspectral rhodopsin function at high altitudes.

Authors:  Gianni M Castiglione; Frances E Hauser; Brian S Liao; Nathan K Lujan; Alexander Van Nynatten; James M Morrow; Ryan K Schott; Nihar Bhattacharyya; Sarah Z Dungan; Belinda S W Chang
Journal:  Proc Natl Acad Sci U S A       Date:  2017-06-22       Impact factor: 11.205

9.  Structural role of the T94I rhodopsin mutation in congenital stationary night blindness.

Authors:  Ankita Singhal; Ying Guo; Milos Matkovic; Gebhard Schertler; Xavier Deupi; Elsa Cy Yan; Joerg Standfuss
Journal:  EMBO Rep       Date:  2016-07-25       Impact factor: 8.807

10.  Helix movement is coupled to displacement of the second extracellular loop in rhodopsin activation.

Authors:  Shivani Ahuja; Viktor Hornak; Elsa C Y Yan; Natalie Syrett; Joseph A Goncalves; Amiram Hirshfeld; Martine Ziliox; Thomas P Sakmar; Mordechai Sheves; Philip J Reeves; Steven O Smith; Markus Eilers
Journal:  Nat Struct Mol Biol       Date:  2009-02-01       Impact factor: 15.369

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