Literature DB >> 15475113

The altered evolutionary trajectories of gene duplicates.

Michael Lynch1, Vaishali Katju.   

Abstract

Gene duplication is widely regarded as the predominant mechanism by which genes with new functions and associated phenotypic novelties arise. However, the mutational events and population-genetic mechanisms that lead to the short-term preservation of duplicate genes are not necessarily the same as those exhibited by well-established paralogs en route to the origin of new beneficial features. Thus, although recent genome-wide analyses have revealed striking patterns of protein-sequence divergence among the members of surviving paralogous gene families, the mechanisms responsible for the historical development of these patterns remain unclear.

Mesh:

Year:  2004        PMID: 15475113     DOI: 10.1016/j.tig.2004.09.001

Source DB:  PubMed          Journal:  Trends Genet        ISSN: 0168-9525            Impact factor:   11.639


  119 in total

1.  Transcriptional silencing functions of the yeast protein Orc1/Sir3 subfunctionalized after gene duplication.

Authors:  Meleah A Hickman; Laura N Rusche
Journal:  Proc Natl Acad Sci U S A       Date:  2010-10-25       Impact factor: 11.205

Review 2.  Mutational effects and the evolution of new protein functions.

Authors:  Misha Soskine; Dan S Tawfik
Journal:  Nat Rev Genet       Date:  2010-08       Impact factor: 53.242

3.  Evolution of an antifreeze protein by neofunctionalization under escape from adaptive conflict.

Authors:  Cheng Deng; C-H Christina Cheng; Hua Ye; Ximiao He; Liangbiao Chen
Journal:  Proc Natl Acad Sci U S A       Date:  2010-11-29       Impact factor: 11.205

4.  Young proteins experience more variable selection pressures than old proteins.

Authors:  Anchal Vishnoi; Sergey Kryazhimskiy; Georgii A Bazykin; Sridhar Hannenhalli; Joshua B Plotkin
Journal:  Genome Res       Date:  2010-10-04       Impact factor: 9.043

5.  Gene Duplicability of Core Genes Is Highly Consistent across All Angiosperms.

Authors:  Zhen Li; Jonas Defoort; Setareh Tasdighian; Steven Maere; Yves Van de Peer; Riet De Smet
Journal:  Plant Cell       Date:  2016-01-07       Impact factor: 11.277

6.  Novel specificities emerge by stepwise duplication of functional modules.

Authors:  José B Pereira-Leal; Sarah A Teichmann
Journal:  Genome Res       Date:  2005-04       Impact factor: 9.043

7.  Gene cooption without duplication during the evolution of a male-pregnancy gene in pipefish.

Authors:  April Harlin-Cognato; Eric A Hoffman; Adam G Jones
Journal:  Proc Natl Acad Sci U S A       Date:  2006-12-08       Impact factor: 11.205

8.  A diffusion approach to approximating preservation probabilities for gene duplicates.

Authors:  Martin O'Hely
Journal:  J Math Biol       Date:  2006-05-06       Impact factor: 2.259

9.  Tandem repetitive D domains of the sperm ligand zonadhesin evolve faster in the paralogue than in the orthologue comparison.

Authors:  Holger Herlyn; Hans Zischler
Journal:  J Mol Evol       Date:  2006-10-06       Impact factor: 2.395

10.  Origins and impact of constraints in evolution of gene families.

Authors:  Boris E Shakhnovich; Eugene V Koonin
Journal:  Genome Res       Date:  2006-10-19       Impact factor: 9.043

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