| Literature DB >> 15471739 |
Lawrence P Hanrahan1, Henry A Anderson, Brian Busby, Marni Bekkedal, Thomas Sieger, Laura Stephenson, Lynda Knobeloch, Mark Werner, Pamela Imm, Joseph Olson.
Abstract
In this article we describe the development of an information system for environmental childhood cancer surveillance. The Wisconsin Cancer Registry annually receives more than 25,000 incident case reports. Approximately 269 cases per year involve children. Over time, there has been considerable community interest in understanding the role the environment plays as a cause of these cancer cases. Wisconsin's Public Health Information Network (WI-PHIN) is a robust web portal integrating both Health Alert Network and National Electronic Disease Surveillance System components. WI-PHIN is the information technology platform for all public health surveillance programs. Functions include the secure, automated exchange of cancer case data between public health-based and hospital-based cancer registrars; web-based supplemental data entry for environmental exposure confirmation and hypothesis testing; automated data analysis, visualization, and exposure-outcome record linkage; directories of public health and clinical personnel for role-based access control of sensitive surveillance information; public health information dissemination and alerting; and information technology security and critical infrastructure protection. For hypothesis generation, cancer case data are sent electronically to WI-PHIN and populate the integrated data repository. Environmental data are linked and the exposure-disease relationships are explored using statistical tools for ecologic exposure risk assessment. For hypothesis testing, case-control interviews collect exposure histories, including parental employment and residential histories. This information technology approach can thus serve as the basis for building a comprehensive system to assess environmental cancer etiology.Entities:
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Year: 2004 PMID: 15471739 PMCID: PMC1247574 DOI: 10.1289/ehp.7150
Source DB: PubMed Journal: Environ Health Perspect ISSN: 0091-6765 Impact factor: 9.031
PHIN information technology functional standards and Wisconsin implementation status.
| PHIN IT function specification | PHIN standard implementation | WI-PHIN status |
|---|---|---|
| 1. Automated data exchange | Establish ebXML-compliant SOAP web service via an HTTPS connection after appropriate authentication;encrypted messages use industry standard ebXML format and include standardized HL7, version 2.3; HL7, version 3.0; X12; and LDIF message content. | Web service capability established; test deployment with several laboratories. |
| 2. Electronic clinical data: event detection | Data received via ebXML messaging identified in function 1 above stored using NEDSS logical data model specification of the HL7 Reference Information Model and extensions. This allows standards-based interaction with commercial products for reporting, statistical analysis, geographic mapping, and automated outbreak detection algorithms, as well as the processing of queued data from and for electronic messages; the data repository should implement common database technology (e.g., Sybase, Oracle, or SQL Server) running on servers using Windows NT/2000/XP, LINUX, or UNIX and supporting ODBC, ANSI standard SQL, and JDBC access. | Data repository established using Oracle 9i; messaging of laboratory data in pilot/production; hospital tumor registries contacted for case messaging; pilot volunteers identified. |
| 3. Web: manual data entry | Secure browser-based data entry for data input and results other reporting from and to primary care clinical care sites and sources; develop web browser–based data systems using open-platform web servers supporting generic web browsers (HTML 3.0+/Java) | Function established; system operates on Sun Solaris using Weblogic application server; capability will be used to obtain supplemental risk and exposure history data. |
| 4. Laboratory result information | Data stored in HL7-compatible data formats; coding of request and results messages with the LOINC and SNOMED vocabularies; information messaging using function 1. | Storage capability established; vocabulary capability in development. |
| 5. Case management | Using functions 1–4 above, cases should be “linked” and traceable from detection via electronic sources of clinical data or manual entry of case data, and through confirmation via laboratory result reporting. | Capability established; PAM-specific business rules in development for linkage and tracking. |
| 6. Analysis and visualization | Commercial reporting systems integrated using ODBC and JDBC data access; security and access control applied for remote access using SSL and certificate- or token-based authentication with appropriate authentication and authorization. | SAS product integrated; ESRI GIS capability in development; SSL and RBAC established. |
| 7. Personnel directories | Directories present an LDAP version 3.0 standard-based service allowing data access and sharing across multiple computer systems and appropriate organizational boundaries; directory information transfer and sharing supports standard message format (LDIF); data fields use X.500 standards for field type and length. | Capability established; directory contains contact information and roles of > 2,400 registered PHIN users from > 900 organizations. |
| 8. Information dissemination and alerting | Receive, manage, and disseminate alerts, protocols, procedures, and other information for dissemination to public health workers, primary care physicians, public health laboratories, and other partners; ability to “push” information via messages and allow participants to “pull” information via the browsing of secure web sites; support of interactive communication sites for threaded discussion capabilities. | Capability established; call-tree alerting system integrated (voice technologies); public and private topic areas, threaded discussion forums established; push digest subscriptions available from bookmarked topic areas, directing appropriate content to audience. |
| 9. IT Security | Meet/exceed HIPAA requirements; client and server X.509 digital certificates or comparable strong authentication methodology for access; establish RBAC protocols and effective administrative policies; employ desktop/server virus scanning, intrusion detection, network vulnerability analysis, security policy monitoring, regular penetration testing, and active threat intelligence; ensure continuity of operations through planning and procedure implementation. | Capability established, including RBAC, administrative policies, auditing, and training; ongoing virus scanning, intrusion detection, threat intelligence, continuity of operations; independent validation and verification in development; client digital certificates in exploratory phase. |
Abbreviations: ANSI, American National Standards Institute; ebXML, Electronic Business using eXtensible Markup Language; ESRI, Environmental Systems Research Institute; HIPAA, Health Insurance Portability and Accountability Act (1996); HL7, Health Level 7; HTTP, Hypertext Transfer Protocol; IT, information technology; JDBC, JAVA Database Connectivity; LDAP, Lightweight Directory Access Protocol; LDIF, Lightweight Data Interchange Format; LOINC, Logical Observation Identifiers; ODBC, Open Database Connectivity; SNOMED, Systemized Nomenclature of Medicine; SOAP, Simple Object Access Protocol; SQL, Structured Query Language.
From CDC (2002).
Figure 1WI-PHIN information flows and services. Abbreviations: HAN, Health Alert Network; PAMs, program area modules; WAMS, State of Wisconsin Web Access Management System.
Wisconsin EPHTN data inventory.
| Abbreviation | Data set | Scope | Description |
|---|---|---|---|
| AEI | Air Emissions Inventory | State | Emissions from mobile sources |
| BRRTS | Bureau of Remediation and Redevelopment Tracking System | State | Database of environmental contamination sites including spills, leaking underground storage tanks, state-response sites, and federal Superfund sites |
| Census | Census | National | Decennial population counts, age, gender, race, census tract, county, ZIP code |
| DWS | Drinking Water System | State | Drinking-water quality in Wisconsin public wells |
| GEMS | Groundwater Environmental Monitoring System | State | Environmental monitoring data for Wisconsin landfills, including landfill gas, groundwater, and other sample types |
| GLAT | Great Lakes Air Toxic Emissions Inventory | Regional | Airborne toxic pollutant emissions affecting air and water quality in eight Great Lakes states |
| GRN | Groundwater Retrieval Network | State | Groundwater quality in Wisconsin private, public, and monitoring wells |
| NATA | National Air Toxics Assessment | National | Estimates of 33 air toxics (a subset of 32 air toxics on the Clean Air Act’s list of 188 air toxics, plus diesel particulate matter) ( |
| NEI | National Emissions Inventory | National | Hazardous and criteria air pollutants |
| PEI | Periodic Emissions Inventory | State | Annual emissions of criterion air pollutants and some noncriterion pollutants |
| RR GIS Registry | Remediation and Redevelopment GIS Registry | State | Sites closed with residual water or soil contamination |
| SHWIMS | Solid and Hazardous Waste Information Management System | State | Sitings for waste management facilities |
| SWAP | Source Water Assessment Plan Database | State | Assessment of possible contamination sources within a specified distance from a drinking water well |
| TRI | Toxics Release Inventory | National | Toxic chemical releases and other waste management activities for specific industry groups and federal facilities |
| WCR | Wisconsin Cancer Registry | State | Cancer incidence by age, gender, race, county, ZIP code, histology, cytology, staging |
| WI Hosp | Wisconsin Hospital Discharge | State | Hospitalizations by age, gender, race, county, ZIP code, cause |
| WMOR | Wisconsin Mortality | State | Mortality by age, gender, race, county, cause |
Wisconsin Cancer Registry 1990–2000: childhood cancer cases frequency by cause (children < 20 years of age).
| Cause | Frequency (%) |
|---|---|
| Leukemia | 672 (22.7) |
| Lymphatic cancers | 428 (14.5) |
| Brain cancer | 413 (14.0) |
| Cervical cancer | 283 (9.6) |
| Bone cancer | 174 (5.9) |
| Soft tissue cancer | 151 (5.1) |
| Kidney and other urinary cancer | 126 (4.3) |
| Thyroid cancer | 91 (3.1) |
| Skin cancer/melanoma and other reportable | 88 (3.0) |
| Other endocrine gland cancer | 74 (2.5) |
| Testicular cancer | 66 (2.2) |
| Eye cancer | 59 (2.0) |
| Ovarian cancer | 58 (2.0) |
| Other central nervous system cancer | 47 (1.6) |
| All other cancers/unknown cancers | 42 (1.4) |
| Oral cancer | 33 (1.1) |
| Peritoneal cancer | 27 (0.9) |
| Liver cancer | 24 (0.8) |
| Nasal cancer | 15 (0.5) |
| Colorectal cancer | 14 (0.5) |
| Other respiratory/thoracic cancer | 14 (0.5) |
| Bladder cancer | 13 (0.4) |
| Bronchus and lung cancer | 11 (0.4) |
| Other female genital cancer | 11 (0.4) |
| Prostate cancer | 7 (0.2) |
| Small intestine cancer | 3 (0.1) |
| Breast cancer | 3 (0.1) |
| Uterine cancer | 3 (0.1) |
| Other leukemias | 3 (0.1) |
| Stomach cancer | 2 (0.1) |
| Pancreatic cancer | 2 (0.1) |
| Laryngeal cancer | 1 (0.0) |
| Pleural cancer | 1 (0.0) |
| Other male genital cancer | 1 (0.0) |
| Total | 2,960 (100.0) |
Figure 2National Air Toxics Assessment: 1996 estimated Wisconsin county median exposure concentration of benzene. From U.S. Environmental Protection Agency/Office of Air Quality Planning and Standards National-Scale Air Toxics Assessment (Technology Transfer Network 2002).
Figure 3Wisconsin age-adjusted childhood leukemia incidence rates per 100,000 by county, 1990–2000.