Literature DB >> 15466555

Involvement of linear plasmids in aerobic biodegradation of vinyl chloride.

Anthony S Danko1, Meizhong Luo, Christopher E Bagwell, Robin L Brigmon, David L Freedman.   

Abstract

Pseudomonas putida strain AJ and Ochrobactrum strain TD were isolated from hazardous waste sites based on their ability to use vinyl chloride (VC) as the sole source of carbon and energy under aerobic conditions. Strains AJ and TD also use ethene and ethylene oxide as growth substrates. Strain AJ contained a linear megaplasmid (approximately 260 kb) when grown on VC or ethene, but it contained no circular plasmids. While strain AJ was growing on ethylene oxide, it was observed to contain a 100-kb linear plasmid, and its ability to use VC as a substrate was retained. The linear plasmids in strain AJ were cured, and the ability of strain AJ to consume VC, ethene, and ethylene oxide was lost following growth on a rich substrate (Luria-Bertani broth) through at least three transfers. Strain TD contained three linear plasmids, ranging in size from approximately 90 kb to 320 kb, when growing on VC or ethene. As with strain AJ, the linear plasmids in strain TD were cured following growth on Luria-Bertani broth and its ability to consume VC and ethene was lost. Further analysis of these linear plasmids may help reveal the pathway for VC biodegradation in strains AJ and TD and explain why this process occurs at many but not all sites where groundwater is contaminated with chloroethenes. Metabolism of VC and ethene by strains AJ and TD is initiated by an alkene monooxygenase. Their yields during growth on VC (0.15 to 0.20 mg of total suspended solids per mg of VC) are similar to the yields reported for other isolates (i.e., Mycobacterium sp., Nocardioides sp., and Pseudomonas sp.).

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Year:  2004        PMID: 15466555      PMCID: PMC522125          DOI: 10.1128/AEM.70.10.6092-6097.2004

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  31 in total

1.  Hydrogen autotrophy of Nocardia opaca strains is encoded by linear megaplasmids.

Authors:  J Kalkus; M Reh; H G Schlegel
Journal:  J Gen Microbiol       Date:  1990-06

2.  Aerobic vinyl chloride metabolism in Mycobacterium aurum L1.

Authors:  S Hartmans; J A De Bont
Journal:  Appl Environ Microbiol       Date:  1992-04       Impact factor: 4.792

3.  ES Critical Reviews: Transformations of halogenated aliphatic compounds.

Authors:  T M Vogel; C S Criddle; P L McCarty
Journal:  Environ Sci Technol       Date:  1987-08       Impact factor: 9.028

4.  Unconventional genomic organization in the alpha subgroup of the Proteobacteria.

Authors:  E Jumas-Bilak; S Michaux-Charachon; G Bourg; M Ramuz; A Allardet-Servent
Journal:  J Bacteriol       Date:  1998-05       Impact factor: 3.490

5.  Biodegradation of cis-dichloroethene as the sole carbon source by a beta-proteobacterium.

Authors:  Nicholas V Coleman; Timothy E Mattes; James M Gossett; Jim C Spain
Journal:  Appl Environ Microbiol       Date:  2002-06       Impact factor: 4.792

6.  Phylogenetic and kinetic diversity of aerobic vinyl chloride-assimilating bacteria from contaminated sites.

Authors:  Nicholas V Coleman; Timothy E Mattes; James M Gossett; Jim C Spain
Journal:  Appl Environ Microbiol       Date:  2002-12       Impact factor: 4.792

7.  Natural formation of vinyl chloride in the terrestrial environment.

Authors:  Frank Keppler; Reinhard Borchers; Jens Pracht; Stefan Rheinberger; Heinz F Scholer
Journal:  Environ Sci Technol       Date:  2002-06-01       Impact factor: 9.028

8.  Involvement of a large plasmid in the degradation of 1,2-dichloroethane by Xanthobacter autotrophicus.

Authors:  G Tardif; C W Greer; D Labbé; P C Lau
Journal:  Appl Environ Microbiol       Date:  1991-06       Impact factor: 4.792

9.  New genomic resources for the honey bee(Apis mellifera L.): development of a deep-coverage BAC library and a preliminary STC database.

Authors:  J P Tomkins; M Luo; G C Fang; D Main; J L Goicoechea; M Atkins; D A Frisch; R E Page; E Guzmán-Novoa; Y Yu; G Hunt; R A Wing
Journal:  Genet Mol Res       Date:  2002-12-31

10.  Distribution of the coenzyme M pathway of epoxide metabolism among ethene- and vinyl chloride-degrading Mycobacterium strains.

Authors:  Nicholas V Coleman; Jim C Spain
Journal:  Appl Environ Microbiol       Date:  2003-10       Impact factor: 4.792

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  16 in total

1.  Involvement of coenzyme M during aerobic biodegradation of vinyl chloride and ethene by Pseudomonas putida strain AJ and Ochrobactrum sp. strain TD.

Authors:  Anthony S Danko; Christopher A Saski; Jeffrey P Tomkins; David L Freedman
Journal:  Appl Environ Microbiol       Date:  2006-05       Impact factor: 4.792

2.  Temporal abundance and activity trends of vinyl chloride (VC)-degrading bacteria in a dilute VC plume at Naval Air Station Oceana.

Authors:  Yi Liang; Laura J Cook; Timothy E Mattes
Journal:  Environ Sci Pollut Res Int       Date:  2017-04-11       Impact factor: 4.223

Review 3.  Study of microbes having potentiality for biodegradation of plastics.

Authors:  Swapan Kumar Ghosh; Sujoy Pal; Sumanta Ray
Journal:  Environ Sci Pollut Res Int       Date:  2013-04-24       Impact factor: 4.223

4.  Association of missense mutations in epoxyalkane coenzyme M transferase with adaptation of Mycobacterium sp. strain JS623 to growth on vinyl chloride.

Authors:  Yang Oh Jin; Samantha Cheung; Nicholas V Coleman; Timothy E Mattes
Journal:  Appl Environ Microbiol       Date:  2010-04-02       Impact factor: 4.792

5.  Hydrolytic dechlorination of chlorothalonil by Ochrobactrum sp. CTN-11 isolated from a chlorothalonil-contaminated soil.

Authors:  Bin Liang; Rong Li; Dong Jiang; Jiquan Sun; Jiguo Qiu; Yanfu Zhao; Shunpeng Li; Jiandong Jiang
Journal:  Curr Microbiol       Date:  2010-02-11       Impact factor: 2.188

6.  Epoxyalkane:Coenzyme M Transferase Gene Diversity and Distribution in Groundwater Samples from Chlorinated-Ethene-Contaminated Sites.

Authors:  Xikun Liu; Timothy E Mattes
Journal:  Appl Environ Microbiol       Date:  2016-05-16       Impact factor: 4.792

7.  Heterologous Expression of Mycobacterium Alkene Monooxygenases in Gram-Positive and Gram-Negative Bacterial Hosts.

Authors:  Victoria McCarl; Mark V Somerville; Mai-Anh Ly; Rebecca Henry; Elissa F Liew; Neil L Wilson; Andrew J Holmes; Nicholas V Coleman
Journal:  Appl Environ Microbiol       Date:  2018-07-17       Impact factor: 4.792

Review 8.  Microbial degradation of chloroethenes: a review.

Authors:  Iva Dolinová; Martina Štrojsová; Miroslav Černík; Jan Němeček; Jiřina Macháčková; Alena Ševců
Journal:  Environ Sci Pollut Res Int       Date:  2017-04-05       Impact factor: 4.223

9.  Identification of polypeptides expressed in response to vinyl chloride, ethene, and epoxyethane in Nocardioides sp. strain JS614 by using peptide mass fingerprinting.

Authors:  Adina S Chuang; Timothy E Mattes
Journal:  Appl Environ Microbiol       Date:  2007-05-04       Impact factor: 4.792

10.  Nocardioides, Sediminibacterium, Aquabacterium, Variovorax, and Pseudomonas linked to carbon uptake during aerobic vinyl chloride biodegradation.

Authors:  Fernanda Paes Wilson; Xikun Liu; Timothy E Mattes; Alison M Cupples
Journal:  Environ Sci Pollut Res Int       Date:  2016-06-24       Impact factor: 4.223

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