Literature DB >> 15466054

Evidence for polyadenylated mRNA in Pseudomonas aeruginosa.

Senthil Selvan Saravanamuthu1, Franz von Götz, Prabhakar Salunkhe, Rathinam Chozhavendan, Robert Geffers, Jan Buer, Burkhard Tümmler, Ivo Steinmetz.   

Abstract

In this paper, we report the synthesis of Pseudomonas aeruginosa cDNA in the presence of oligo(dT) primers. Hybridization of oligonucleotide DNA microarrays indicates that under the experimental conditions used, at least 43.7% of the expressed genes from P. aeruginosa PAO1, representing many different functional classes, can be detected by using oligo(dT)-primed cDNAs.

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Year:  2004        PMID： 15466054      PMCID： PMC522214          DOI： 10.1128/JB.186.20.7015-7018.2004

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  21 in total

1.  Host factor Hfq of Escherichia coli stimulates elongation of poly(A) tails by poly(A) polymerase I.

Authors:  E Hajnsdorf; P Régnier
Journal:  Proc Natl Acad Sci U S A       Date:  2000-02-15       Impact factor: 11.205

Review 2.  Emerging features of mRNA decay in bacteria.

Authors:  D A Steege
Journal:  RNA       Date:  2000-08       Impact factor: 4.942

3.  Oligo(dT)-primed synthesis of cDNA by reverse transcriptase in mycobacteria.

Authors:  L Rindi; N Lari; M G Gil; C Garzelli
Journal:  Biochem Biophys Res Commun       Date:  1998-07-20       Impact factor: 3.575

4.  Highly adherent small-colony variants of Pseudomonas aeruginosa in cystic fibrosis lung infection.

Authors:  Susanne Häußler; Isabell Ziegler; Alexandra Löttel; Franz V Götz; Manfred Rohde; Dirk Wehmhöhner; Selvan Saravanamuthu; Burkhard Tümmler; Ivo Steinmetz
Journal:  J Med Microbiol       Date:  2003-04       Impact factor: 2.472

5.  Poly(A) polymerase activity and RNA polyadenylation in Streptomyces coelicolor A3(2).

Authors:  P Bralley; G H Jones
Journal:  Mol Microbiol       Date:  2001-06       Impact factor: 3.501

6.  Complete genome sequence of Pseudomonas aeruginosa PAO1, an opportunistic pathogen.

Authors:  C K Stover; X Q Pham; A L Erwin; S D Mizoguchi; P Warrener; M J Hickey; F S Brinkman; W O Hufnagle; D J Kowalik; M Lagrou; R L Garber; L Goltry; E Tolentino; S Westbrock-Wadman; Y Yuan; L L Brody; S N Coulter; K R Folger; A Kas; K Larbig; R Lim; K Smith; D Spencer; G K Wong; Z Wu; I T Paulsen; J Reizer; M H Saier; R E Hancock; S Lory; M V Olson
Journal:  Nature       Date:  2000-08-31       Impact factor: 49.962

7.  Polynucleotide phosphorylase, RNase II and RNase E play different roles in the in vivo modulation of polyadenylation in Escherichia coli.

Authors:  B K Mohanty; S R Kushner
Journal:  Mol Microbiol       Date:  2000-05       Impact factor: 3.501

8.  Growth-rate dependent RNA polyadenylation in Escherichia coli.

Authors:  Jacek Jasiecki; Grzegorz Wegrzyn
Journal:  EMBO Rep       Date:  2003-02       Impact factor: 8.807

9.  Priming reverse transcription with oligo(dT) does not yield representative samples of Mycobacterium tuberculosis cDNA.

Authors:  David L Lakey; Yueru Zhang; Adel M Talaat; Buka Samten; Lucy E DesJardin; Kathleen D Eisenach; Stephen A Johnston; Peter F Barnes
Journal:  Microbiology       Date:  2002-08       Impact factor: 2.777

10.  Expression analysis of a highly adherent and cytotoxic small colony variant of Pseudomonas aeruginosa isolated from a lung of a patient with cystic fibrosis.

Authors:  Franz von Götz; Susanne Häussler; Doris Jordan; Senthil Selvan Saravanamuthu; Dirk Wehmhöner; André Strüssmann; Joerg Lauber; Ina Attree; Jan Buer; Burkhard Tümmler; Ivo Steinmetz
Journal:  J Bacteriol       Date:  2004-06       Impact factor: 3.490
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  6 in total

Review 1.  Bacterial/archaeal/organellar polyadenylation.

Authors:  Bijoy K Mohanty; Sidney R Kushner
Journal:  Wiley Interdiscip Rev RNA       Date:  2011 Mar-Apr       Impact factor: 9.957

2.  Structural changes and differentially expressed genes in Pseudomonas aeruginosa exposed to meropenem-ciprofloxacin combination.

Authors:  Vera Lúcia Dias Siqueira; Rosilene Fressatti Cardoso; Katiany Rizzieri Caleffi-Ferracioli; Regiane Bertin de Lima Scodro; Maria Aparecida Fernandez; Adriana Fiorini; Tania Ueda-Nakamura; Benedito Prado Dias-Filho; Celso Vataru Nakamura
Journal:  Antimicrob Agents Chemother       Date:  2014-05-05       Impact factor: 5.191

3.  Functional genomics of stress response in Pseudomonas putida KT2440.

Authors:  Oleg N Reva; Christian Weinel; Miryam Weinel; Kerstin Böhm; Diana Stjepandic; Jörg D Hoheisel; Burkhard Tümmler
Journal:  J Bacteriol       Date:  2006-06       Impact factor: 3.490

4.  Prevalence of algD, pslD, pelF, Ppgl, and PAPI-1 Genes Involved in Biofilm Formation in Clinical Pseudomonas aeruginosa Strains.

Authors:  Hakime Rajabi; Himen Salimizand; Mazaher Khodabandehloo; Amirhossein Fayyazi; Rashid Ramazanzadeh
Journal:  Biomed Res Int       Date:  2022-05-24       Impact factor: 3.246

5.  Differential transcription profiling of the phage LUZ19 infection process in different growth media.

Authors:  Ana Brandão; Diana P Pires; Lucas Coppens; Marleen Voet; Rob Lavigne; Joana Azeredo
Journal:  RNA Biol       Date:  2021-01-15       Impact factor: 4.652

6.  In-vivo expression profiling of Pseudomonas aeruginosa infections reveals niche-specific and strain-independent transcriptional programs.

Authors:  Piotr Bielecki; Jacek Puchałka; Melissa L Wos-Oxley; Holger Loessner; Justyna Glik; Marek Kawecki; Mariusz Nowak; Burkhard Tümmler; Siegfried Weiss; Vítor A P Martins dos Santos
Journal:  PLoS One       Date:  2011-09-12       Impact factor: 3.240
  6 in total

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