Literature DB >> 15461137

Rapid isolation of high-quality total RNA from taxus and ginkgo.

Zhihua Liao1, Min Chen, Liang Guo, Yifu Gong, Feng Tang, Xiaofen Sun, Kexuan Tang.   

Abstract

An easy and efficient protocol was developed for isolating good-quality total RNA from various tissues including fruits, leaves, stems, and roots of ancient gymnosperm species, taxus and ginkgo. The protocol was developed based on the CTAB method with modifications, including higher-strength CTAB to help the lysis of plant cells, more PVP, and beta-mercaptoethanol to prevent oxidation of phenolic complexes, and higher-centrifugation force to get rid of most cell debris and to ensure RNA quality. In RNA isolation, chloroform/isoamyl alcohol was used to remove proteins, genomic DNA, and secondary metabolites and lithium chloride was subsequently adopted to concentrate total RNA away from most of the cytoplasmic components. Good-quality total RNA from various tissues of native taxus and ginkgo could be easily isolated within 24 hr by this protocol which avoided the limitation of plant materials and the usage of dangerous chemicals, such as phenol, and could provide total RNA for all kinds of further molecular studies.

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Year:  2004        PMID: 15461137     DOI: 10.1081/PB-200026790

Source DB:  PubMed          Journal:  Prep Biochem Biotechnol        ISSN: 1082-6068            Impact factor:   2.162


  38 in total

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Journal:  Plant Cell Rep       Date:  2011-01-30       Impact factor: 4.570

2.  Isolation, characterization, and function analysis of a flavonol synthase gene from Ginkgo biloba.

Authors:  Feng Xu; Linling Li; Weiwei Zhang; Hua Cheng; Nannan Sun; Shuiyuan Cheng; Yan Wang
Journal:  Mol Biol Rep       Date:  2011-06-05       Impact factor: 2.316

3.  Metabolic interaction between anthocyanin and lignin biosynthesis is associated with peroxidase FaPRX27 in strawberry fruit.

Authors:  Ludwig Ring; Su-Ying Yeh; Stephanie Hücherig; Thomas Hoffmann; Rosario Blanco-Portales; Mathieu Fouche; Carmen Villatoro; Béatrice Denoyes; Amparo Monfort; José Luis Caballero; Juan Muñoz-Blanco; Jonathan Gershenson; Wilfried Schwab
Journal:  Plant Physiol       Date:  2013-07-08       Impact factor: 8.340

4.  An efficient method for the extraction of high-quality fungal total RNA to study the Mycosphaerella fijiensis-Musa spp. Interaction.

Authors:  Aminael Sánchez-Rodríguez; Orelvis Portal; Luis E Rojas; Bárbara Ocaña; Milady Mendoza; Mayra Acosta; Elio Jiménez; Monica Höfte
Journal:  Mol Biotechnol       Date:  2008-11       Impact factor: 2.695

5.  Deciphering the role of aspartate and prephenate aminotransferase activities in plastid nitrogen metabolism.

Authors:  Fernando de la Torre; Jorge El-Azaz; Concepción Avila; Francisco M Cánovas
Journal:  Plant Physiol       Date:  2013-12-02       Impact factor: 8.340

6.  Efficient isolation of high quality nucleic acids from different tissues of Taxus baccata L.

Authors:  Abolghasem Abbasi Kejani; Sayed Ali Hosseini Tafreshi; Sayed Mojtaba Khayyam Nekouei; Mohammad Reza Mofid
Journal:  Mol Biol Rep       Date:  2009-07-04       Impact factor: 2.316

7.  Glucosylation of 4-Hydroxy-2,5-Dimethyl-3(2H)-Furanone, the Key Strawberry Flavor Compound in Strawberry Fruit.

Authors:  Chuankui Song; Xiaotong Hong; Shuai Zhao; Jingyi Liu; Katja Schulenburg; Fong-Chin Huang; Katrin Franz-Oberdorf; Wilfried Schwab
Journal:  Plant Physiol       Date:  2016-03-18       Impact factor: 8.340

8.  Differential effects of NAA and 2,4-D in reducing floret abscission in cestrum (Cestrum elegans) cut flowers are associated with their differential activation of Aux/IAA homologous genes.

Authors:  Bekele Abebie; Amnon Lers; Sonia Philosoph-Hadas; Raphael Goren; Joseph Riov; Shimon Meir
Journal:  Ann Bot       Date:  2007-06-25       Impact factor: 4.357

9.  Seasonal-based temporal changes fluctuate expression patterns of TXS, DBAT, BAPT and DBTNBT genes alongside production of associated taxanes in Taxus baccata.

Authors:  Jaber Nasiri; Mohammad Reza Naghavi; Houshang Alizadeh; Mohammad Reza Fattahi Moghadam
Journal:  Plant Cell Rep       Date:  2016-02-16       Impact factor: 4.570

10.  Cloning and functional characterization of carotenoid cleavage dioxygenase 4 genes.

Authors:  Fong-Chin Huang; Péter Molnár; Wilfried Schwab
Journal:  J Exp Bot       Date:  2009-05-12       Impact factor: 6.992

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