Literature DB >> 15454527

Heterochromatin spreading at yeast telomeres occurs in M phase.

Kristen Martins-Taylor1, Mary Lou Dula, Scott G Holmes.   

Abstract

Heterochromatin regulation of gene expression exhibits epigenetic inheritance, in which some feature of the structure is retained and can reseed formation in new cells. To understand the cell-cycle events that influence heterochromatin assembly and maintenance in budding yeast, we have conducted two types of experiments. First we have examined the kinetics of heterochromatin spreading at telomeres. We have constructed a strain in which the efficient silencing of a telomere-linked URA3 gene depends on the inducible expression of the Sir3 silencing factor. Prior studies determined that S-phase passage was required for the establishment of silencing at the HM loci in yeast. We find that establishment of silencing in our strain occurs at a point coincident with mitosis and does not require S-phase passage. In addition, we find that passage through mitosis is sufficient to establish silencing at the HML locus in a strain bearing a conditional allele of SIR3. Finally, we have also assessed the stability of yeast heterochromatin in the absence of the cis-acting elements required for its establishment. We show that silencing is stable through S phase in the absence of silencers and therefore possesses the ability to self-propagate through DNA replication. However, silencing is lost in the absence of silencers during progression through M phase. These experiments point to crucial events in mitosis influencing the assembly and persistence of heterochromatin.

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Year:  2004        PMID: 15454527      PMCID: PMC1448083          DOI: 10.1534/genetics.103.020149

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  33 in total

1.  Ordered nucleation and spreading of silenced chromatin in Saccharomyces cerevisiae.

Authors:  Laura N Rusché; Ann L Kirchmaier; Jasper Rine
Journal:  Mol Biol Cell       Date:  2002-07       Impact factor: 4.138

2.  Acetylation of the yeast histone H4 N terminus regulates its binding to heterochromatin protein SIR3.

Authors:  Andrew A Carmen; Lisa Milne; Michael Grunstein
Journal:  J Biol Chem       Date:  2001-11-19       Impact factor: 5.157

Review 3.  Transcriptional silencing in Saccharomyces cerevisiae and Schizosaccharomyces pombe.

Authors:  Ying Huang
Journal:  Nucleic Acids Res       Date:  2002-04-01       Impact factor: 16.971

4.  The boundaries of the silenced HMR domain in Saccharomyces cerevisiae.

Authors:  D Donze; C R Adams; J Rine; R T Kamakaka
Journal:  Genes Dev       Date:  1999-03-15       Impact factor: 11.361

5.  Sir2p and Sas2p opposingly regulate acetylation of yeast histone H4 lysine16 and spreading of heterochromatin.

Authors:  Noriyuki Suka; Kunheng Luo; Michael Grunstein
Journal:  Nat Genet       Date:  2002-10-15       Impact factor: 38.330

6.  Mutation of YCS4, a budding yeast condensin subunit, affects mitotic and nonmitotic chromosome behavior.

Authors:  Needhi Bhalla; Sue Biggins; Andrew W Murray
Journal:  Mol Biol Cell       Date:  2002-02       Impact factor: 4.138

7.  Yeast heterochromatin is a dynamic structure that requires silencers continuously.

Authors:  T H Cheng; M R Gartenberg
Journal:  Genes Dev       Date:  2000-02-15       Impact factor: 11.361

8.  Steps in assembly of silent chromatin in yeast: Sir3-independent binding of a Sir2/Sir4 complex to silencers and role for Sir2-dependent deacetylation.

Authors:  Georg J Hoppe; Jason C Tanny; Adam D Rudner; Scott A Gerber; Sherwin Danaie; Steven P Gygi; Danesh Moazed
Journal:  Mol Cell Biol       Date:  2002-06       Impact factor: 4.272

9.  Rap1-Sir4 binding independent of other Sir, yKu, or histone interactions initiates the assembly of telomeric heterochromatin in yeast.

Authors:  Kunheng Luo; Miguel A Vega-Palas; Michael Grunstein
Journal:  Genes Dev       Date:  2002-06-15       Impact factor: 11.361

10.  Establishment of transcriptional silencing in the absence of DNA replication.

Authors:  Y C Li; T H Cheng; M R Gartenberg
Journal:  Science       Date:  2001-01-26       Impact factor: 47.728

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  19 in total

1.  Promoter strength influences the S phase requirement for establishment of silencing at the Saccharomyces cerevisiae silent mating type Loci.

Authors:  Jie Ren; Chia-Lin Wang; Rolf Sternglanz
Journal:  Genetics       Date:  2010-08-02       Impact factor: 4.562

2.  A cis-acting tRNA gene imposes the cell cycle progression requirement for establishing silencing at the HMR locus in yeast.

Authors:  Asmitha G Lazarus; Scott G Holmes
Journal:  Genetics       Date:  2010-12-06       Impact factor: 4.562

3.  New alleles of SIR2 define cell-cycle-specific silencing functions.

Authors:  Mirela Matecic; Kristen Martins-Taylor; Merrit Hickman; Jason Tanny; Danesh Moazed; Scott G Holmes
Journal:  Genetics       Date:  2006-06-18       Impact factor: 4.562

4.  Mcm10 mediates the interaction between DNA replication and silencing machineries.

Authors:  Ivan Liachko; Bik K Tye
Journal:  Genetics       Date:  2008-12-08       Impact factor: 4.562

5.  Sir3 and epigenetic inheritance of silent chromatin in Saccharomyces cerevisiae.

Authors:  Tina Motwani; Minakshi Poddar; Scott G Holmes
Journal:  Mol Cell Biol       Date:  2012-05-14       Impact factor: 4.272

6.  Roles of chromatin remodeling factors in the formation and maintenance of heterochromatin structure.

Authors:  Qun Yu; Xinmin Zhang; Xin Bi
Journal:  J Biol Chem       Date:  2011-03-09       Impact factor: 5.157

Review 7.  The Nuts and Bolts of Transcriptionally Silent Chromatin in Saccharomyces cerevisiae.

Authors:  Marc R Gartenberg; Jeffrey S Smith
Journal:  Genetics       Date:  2016-08       Impact factor: 4.562

8.  Proliferating cell nuclear antigen (PCNA) is required for cell cycle-regulated silent chromatin on replicated and nonreplicated genes.

Authors:  Andrew Miller; Jiji Chen; Taichi E Takasuka; Jennifer L Jacobi; Paul D Kaufman; Joseph M K Irudayaraj; Ann L Kirchmaier
Journal:  J Biol Chem       Date:  2010-09-02       Impact factor: 5.157

9.  Replication and active demethylation represent partially overlapping mechanisms for erasure of H3K4me3 in budding yeast.

Authors:  Marta Radman-Livaja; Chih Long Liu; Nir Friedman; Stuart L Schreiber; Oliver J Rando
Journal:  PLoS Genet       Date:  2010-02-05       Impact factor: 5.917

10.  HST3/HST4-dependent deacetylation of lysine 56 of histone H3 in silent chromatin.

Authors:  Bo Yang; Andrew Miller; Ann L Kirchmaier
Journal:  Mol Biol Cell       Date:  2008-09-17       Impact factor: 4.138

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