Literature DB >> 15448151

Use of a randomized hybrid ribozyme library for identification of genes involved in muscle differentiation.

Renu Wadhwa1, Tomoko Yaguchi, Kamaljit Kaur, Eigo Suyama, Hiroyuki Kawasaki, Kazunari Taira, Sunil C Kaul.   

Abstract

We have employed the hybrid hammerhead ribozyme-based gene discovery system for identification of genes functionally involved in muscle differentiation using in vitro myoblast differentiation assay. The major muscle regulatory genes (MyoD1, Mylk, myosin, myogenin, and Myf5) were identified endorsing the validity of this method. Other gene targets included tumor suppressors and cell cycle regulators (p19ARF and p21WAF1), FGFR-4, fibronectin, Prkg2, Pdk4, fem, and six novel proteins. Functional involvement of three of the identified targets in myoblast differentiation was confirmed by their specific knockdown using ribozymes and siRNA. Besides demonstrating a simple and an effective method of isolation of gene functions involved in muscle differentiation, we report for the first time that overexpression of Fem, a member of the sex-determining family of proteins, caused accelerated myotube formation, and its targeting deferred myoblast differentiation. This functional gene screening is not only helpful in understanding the molecular pathways of muscle differentiation but also to design molecular strategies for myopathologic therapies.

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Year:  2004        PMID: 15448151     DOI: 10.1074/jbc.M407428200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  6 in total

Review 1.  Use of forward genetics to discover novel regulators of NF-kappaB.

Authors:  Tao Lu; George R Stark
Journal:  Cold Spring Harb Perspect Biol       Date:  2009-12-23       Impact factor: 10.005

2.  Direct selection of trans-acting ligase ribozymes by in vitro compartmentalization.

Authors:  Matthew Levy; Karl E Griswold; Andrew D Ellington
Journal:  RNA       Date:  2005-08-30       Impact factor: 4.942

3.  Selection of an improved RNA polymerase ribozyme with superior extension and fidelity.

Authors:  Hani S Zaher; Peter J Unrau
Journal:  RNA       Date:  2007-07       Impact factor: 4.942

4.  Use of a U16 snoRNA-containing ribozyme library to identify ribozyme targets in HIV-1.

Authors:  Hoshang J Unwalla; Haitang Li; Shi-Yang Li; Danny Abad; John J Rossi
Journal:  Mol Ther       Date:  2008-04-01       Impact factor: 11.454

5.  Selective killing of cancer cells by Ashwagandha leaf extract and its component Withanone involves ROS signaling.

Authors:  Nashi Widodo; Didik Priyandoko; Navjot Shah; Renu Wadhwa; Sunil C Kaul
Journal:  PLoS One       Date:  2010-10-21       Impact factor: 3.240

6.  Loss-of-function screening to identify miRNAs involved in senescence: tumor suppressor activity of miRNA-335 and its new target CARF.

Authors:  Yue Yu; Ran Gao; Zeenia Kaul; Ling Li; Yoshio Kato; Zhenya Zhang; Joanna Groden; Sunil C Kaul; Renu Wadhwa
Journal:  Sci Rep       Date:  2016-07-26       Impact factor: 4.379

  6 in total

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