Literature DB >> 20516132

Use of forward genetics to discover novel regulators of NF-kappaB.

Tao Lu1, George R Stark.   

Abstract

Forward and reverse genetic experiments have both played important roles in revealing critical aspects of mammalian signal transduction pathways in cell culture experiments. Only recently have we begun to comprehend the depth, breadth, and complexity of these pathways and of their interrelationships. Here, we summarize successful examples in which different forward genetic approaches have led to novel discoveries in NF-kappaB signaling. We believe that forward genetics will continue to play an irreplaceable role in advancing our understanding of the complexities of the pathways that regulate the functions of this key transcription factor.

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Year:  2009        PMID: 20516132      PMCID: PMC2869522          DOI: 10.1101/cshperspect.a001966

Source DB:  PubMed          Journal:  Cold Spring Harb Perspect Biol        ISSN: 1943-0264            Impact factor:   10.005


  45 in total

1.  Interleukin-1 (IL-1) receptor-associated kinase-dependent IL-1-induced signaling complexes phosphorylate TAK1 and TAB2 at the plasma membrane and activate TAK1 in the cytosol.

Authors:  Zhengfan Jiang; Jun Ninomiya-Tsuji; Youcun Qian; Kunihiro Matsumoto; Xiaoxia Li
Journal:  Mol Cell Biol       Date:  2002-10       Impact factor: 4.272

Review 2.  Control of NF-kappaB-dependent transcriptional responses by chromatin organization.

Authors:  Gioacchino Natoli
Journal:  Cold Spring Harb Perspect Biol       Date:  2009-10       Impact factor: 10.005

3.  Genetic screens in mammalian cells by enhanced retroviral mutagens.

Authors:  D Liu; X Yang; D Yang; Z Songyang
Journal:  Oncogene       Date:  2000-12-07       Impact factor: 9.867

4.  Gene trap mutagenesis-based forward genetic approach reveals that the tumor suppressor OVCA1 is a component of the biosynthetic pathway of diphthamide on elongation factor 2.

Authors:  Yoshitaka Nobukuni; Kenji Kohno; Kiyoshi Miyagawa
Journal:  J Biol Chem       Date:  2005-01-05       Impact factor: 5.157

5.  Act1, an NF-kappa B-activating protein.

Authors:  X Li; M Commane; H Nie; X Hua; M Chatterjee-Kishore; D Wald; M Haag; G R Stark
Journal:  Proc Natl Acad Sci U S A       Date:  2000-09-12       Impact factor: 11.205

6.  CIKS, a connection to Ikappa B kinase and stress-activated protein kinase.

Authors:  A Leonardi; A Chariot; E Claudio; K Cunningham; U Siebenlist
Journal:  Proc Natl Acad Sci U S A       Date:  2000-09-12       Impact factor: 11.205

7.  IL-1-induced NFkappa B and c-Jun N-terminal kinase (JNK) activation diverge at IL-1 receptor-associated kinase (IRAK).

Authors:  X Li; M Commane; Z Jiang; G R Stark
Journal:  Proc Natl Acad Sci U S A       Date:  2001-04-03       Impact factor: 11.205

8.  Transposition from a gutless adeno-transposon vector stabilizes transgene expression in vivo.

Authors:  Stephen R Yant; Anja Ehrhardt; Jacob Giehm Mikkelsen; Leonard Meuse; Thao Pham; Mark A Kay
Journal:  Nat Biotechnol       Date:  2002-09-16       Impact factor: 54.908

9.  Dominant negative form of signal-regulatory protein-alpha (SIRPalpha /SHPS-1) inhibits tumor necrosis factor-mediated apoptosis by activation of NF-kappa B.

Authors:  Nickolay Neznanov; Lubov Neznanova; Roman V Kondratov; Ludmila Burdelya; Eugene S Kandel; Donald M O'Rourke; Axel Ullrich; Andrei V Gudkov
Journal:  J Biol Chem       Date:  2002-11-24       Impact factor: 5.157

10.  A requirement for CARMA1 in TCR-induced NF-kappa B activation.

Authors:  Donghai Wang; Yun You; Sara M Case; Linda M McAllister-Lucas; Lin Wang; Peter S DiStefano; Gabriel Nuñez; John Bertin; Xin Lin
Journal:  Nat Immunol       Date:  2002-08-05       Impact factor: 25.606

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  6 in total

1.  Identification of an N-terminal truncation of the NF-κB p65 subunit that specifically modulates ribosomal protein S3-dependent NF-κB gene expression.

Authors:  Eric M Wier; Jordan Neighoff; Xin Sun; Kai Fu; Fengyi Wan
Journal:  J Biol Chem       Date:  2012-10-31       Impact factor: 5.157

2.  Lysine methylation of promoter-bound transcription factors and relevance to cancer.

Authors:  George R Stark; Yuxin Wang; Tao Lu
Journal:  Cell Res       Date:  2010-12-14       Impact factor: 25.617

3.  Other ways to skin a cat: activating SREBP without Scap.

Authors:  Cafer Ozdemir; Robert B Rawson
Journal:  Fly (Austin)       Date:  2011-01-01       Impact factor: 2.160

Review 4.  NF-κB: Regulation by Methylation.

Authors:  Tao Lu; George R Stark
Journal:  Cancer Res       Date:  2015-09-03       Impact factor: 12.701

5.  Caspase-3 cleaved p65 fragment dampens NF-κB-mediated anti-apoptotic transcription by interfering with the p65/RPS3 interaction.

Authors:  Eric M Wier; Kai Fu; Andrea Hodgson; Xin Sun; Fengyi Wan
Journal:  FEBS Lett       Date:  2015-10-23       Impact factor: 4.124

6.  Forward genetic screening for regulators involved in cholesterol synthesis using validation-based insertional mutagenesis.

Authors:  Wei Jiang; Jing-Jie Tang; Hong-Hua Miao; Yu-Xiu Qu; Jie Qin; Jie Xu; Jinbo Yang; Bo-Liang Li; Bao-Liang Song
Journal:  PLoS One       Date:  2014-11-26       Impact factor: 3.240

  6 in total

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