Literature DB >> 15390352

New satellite DNA in Lacerta s. str. lizards (Sauria: Lacertidae): evolutionary pathways and phylogenetic impact.

Doina Ciobanu1, Vernata V Grechko, Ilya S Darevsky, Dmitri A Kramerov.   

Abstract

A new tandemly repeated (satellite) DNA family namely Agi160, from Lacerta agilis and Lacerta strigata (Lacerta sensu stricto (s. str.), Linnaeus 1758) have been cloned and sequenced. Agi160 is found in the above two species, as well as two other representatives of the same genus, L. viridis and L. media. DNA hybridization did not reveal it in Darevskia, Podarcis, Zootoca, Eremias, Ophisops, and Gallotia - the other genera of the family Lacertidae. The results suggest that Agi160 is a Lacerta s. str. specific family of tandem DNA repeats. However, a comparison between sequences of Agi160 and CLsat repeat units revealed 60 bp regions 62-74% identical. The latter is a satellite DNA family typical for Darevskia (syn. "L. saxicola complex") (Grechko et al., Molecular-genetic classification and phylogenetic relatedness of some species of Lacertidae lizards by taxonoprint data. Mol Biol 32:172-183, 1988.). Both Agi160 and CLsat tandem repeats share several common features (e.g., the same AT content and distribution of multiple short A-T runs, internal structure of repeated units, the presence of conservative regions). These data are indicative of their common origin and a possibly strong selective pressure upon conserving both satellites. A comparative analysis of structure, organization, and abundance of these two families of satDNA reveals evolutionary pathways that led to their formation and divergence. The data are consistent with the hypotheses of the concerted evolution of satellite DNA families. The possibility of use of Agi160 as a phylogenetic tool, defining relationships within Lacerta s. str., as well as within the whole family of Lacertidae is discussed. Copyright 2004 Wiley-Liss, Inc.

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Year:  2004        PMID: 15390352     DOI: 10.1002/jez.b.21014

Source DB:  PubMed          Journal:  J Exp Zool B Mol Dev Evol        ISSN: 1552-5007            Impact factor:   2.656


  7 in total

1.  Evolutionary dynamics of two satellite DNA families in rock lizards of the genus Iberolacerta (Squamata, Lacertidae): different histories but common traits.

Authors:  Verónica Rojo; Andrés Martínez-Lage; Massimo Giovannotti; Ana M González-Tizón; Paola Nisi Cerioni; Vincenzo Caputo Barucchi; Pedro Galán; Ettore Olmo; Horacio Naveira
Journal:  Chromosome Res       Date:  2015-09       Impact factor: 5.239

2.  Characterization of the satellite DNA Msat-160 from species of Terricola (Microtus) and Arvicola (Rodentia, Arvicolinae).

Authors:  Manuel J Acosta; Juan A Marchal; Cecilia Fernández-Espartero; Ismael Romero-Fernández; Michail T Rovatsos; Eva B Giagia-Athanasopoulou; Ekaterina Gornung; Riccardo Castiglia; Antonio Sánchez
Journal:  Genetica       Date:  2010-09-10       Impact factor: 1.082

3.  Chromosomal study of a lamprey (Lampetra zanandreai Vladykov, 1955) (Petromyzonida: Petromyzontiformes): conventional and FISH analysis.

Authors:  Vincenzo Caputo; Massimo Giovannotti; Paola Nisi Cerioni; Andrea Splendiani; James Tagliavini; Ettore Olmo
Journal:  Chromosome Res       Date:  2011-03-25       Impact factor: 5.239

4.  Molecular cloning and characterization of satellite DNA sequences from constitutive heterochromatin of the habu snake (Protobothrops flavoviridis, Viperidae) and the Burmese python (Python bivittatus, Pythonidae).

Authors:  Kazumi Matsubara; Yoshinobu Uno; Kornsorn Srikulnath; Risako Seki; Chizuko Nishida; Yoichi Matsuda
Journal:  Chromosoma       Date:  2015-07-24       Impact factor: 4.316

5.  Microchromosome polymorphism in the sand lizard, Lacerta agilis Linnaeus, 1758 (Reptilia, Squamata).

Authors:  Artem P Lisachov; Pavel M Borodin
Journal:  Comp Cytogenet       Date:  2016-09-08       Impact factor: 1.800

Review 6.  Consequence of Paradigm Shift with Repeat Landscapes in Reptiles: Powerful Facilitators of Chromosomal Rearrangements for Diversity and Evolution.

Authors:  Syed Farhan Ahmad; Worapong Singchat; Maryam Jehangir; Thitipong Panthum; Kornsorn Srikulnath
Journal:  Genes (Basel)       Date:  2020-07-21       Impact factor: 4.096

Review 7.  Lizards as Model Organisms of Sex Chromosome Evolution: What We Really Know from a Systematic Distribution of Available Data?

Authors:  Marcello Mezzasalma; Fabio M Guarino; Gaetano Odierna
Journal:  Genes (Basel)       Date:  2021-08-28       Impact factor: 4.096

  7 in total

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