Literature DB >> 15388087

Optimized pathway selection in intraresidual triple-resonance experiments.

Helena Tossavainen1, Perttu Permi.   

Abstract

An optimized intraresidual pulse sequence element with better sensitivity and suppression of sequential cross peaks is presented. Concatenation of three magnetization transfer delays allows their independent setting, in accordance with the relaxation properties of the individual spins, without concomitantly prolonging the pulse sequence. Additionally, implementations of the scheme to HNCA, HNCACB, and the TROSY based triple-resonance experiments are proposed. The feasibility of the new element was verified by recording HNCA and HNCACB on the small 8.6 kDa protein ubiquitin. The corresponding HNCA-TROSY experiment was tested on a larger protein, the 30.4 kDa Cel6A from the thermophilic soil bacterium Thermobifida fusca at 800 (1)H MHz.

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Year:  2004        PMID: 15388087     DOI: 10.1016/j.jmr.2004.06.018

Source DB:  PubMed          Journal:  J Magn Reson        ISSN: 1090-7807            Impact factor:   2.229


  7 in total

1.  Recognition of tandem PxxP motifs as a unique Src homology 3-binding mode triggers pathogen-driven actin assembly.

Authors:  Olli Aitio; Maarit Hellman; Arunas Kazlauskas; Didier F Vingadassalom; John M Leong; Kalle Saksela; Perttu Permi
Journal:  Proc Natl Acad Sci U S A       Date:  2010-11-22       Impact factor: 11.205

2.  HA-detected experiments for the backbone assignment of intrinsically disordered proteins.

Authors:  Sampo Mäntylahti; Olli Aitio; Maarit Hellman; Perttu Permi
Journal:  J Biomol NMR       Date:  2010-05-01       Impact factor: 2.835

3.  Bridge over troubled proline: assignment of intrinsically disordered proteins using (HCA)CON(CAN)H and (HCA)N(CA)CO(N)H experiments concomitantly with HNCO and i(HCA)CO(CA)NH.

Authors:  Maarit Hellman; Henni Piirainen; Veli-Pekka Jaakola; Perttu Permi
Journal:  J Biomol NMR       Date:  2013-12-18       Impact factor: 2.835

4.  Extension of the HA-detection based approach: (HCA)CON(CA)H and (HCA)NCO(CA)H experiments for the main-chain assignment of intrinsically disordered proteins.

Authors:  Sampo Mäntylahti; Maarit Hellman; Perttu Permi
Journal:  J Biomol NMR       Date:  2011-01-25       Impact factor: 2.835

5.  An intraresidual i(HCA)CO(CA)NH experiment for the assignment of main-chain resonances in 15N, 13C labeled proteins.

Authors:  Sampo Mäntylahti; Helena Tossavainen; Maarit Hellman; Perttu Permi
Journal:  J Biomol NMR       Date:  2009-11       Impact factor: 2.835

6.  Solid-state NMR analysis of membrane proteins and protein aggregates by proton detected spectroscopy.

Authors:  Donghua H Zhou; Andrew J Nieuwkoop; Deborah A Berthold; Gemma Comellas; Lindsay J Sperling; Ming Tang; Gautam J Shah; Elliott J Brea; Luisel R Lemkau; Chad M Rienstra
Journal:  J Biomol NMR       Date:  2012-09-18       Impact factor: 2.835

7.  Characterization of intrinsically disordered prostate associated gene (PAGE5) at single residue resolution by NMR spectroscopy.

Authors:  Maarit Hellman; Helena Tossavainen; Pekka Rappu; Jyrki Heino; Perttu Permi
Journal:  PLoS One       Date:  2011-11-02       Impact factor: 3.240

  7 in total

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