Literature DB >> 15379655

SNP discovery and typing technologies for pharmacogenomics.

Richard M Twyman1.   

Abstract

Genetic variation in the human genome occurs predominantly as single nucleotide polymorphisms (SNPs). Our DNA may contain as many as ten million SNPs, of which three million or more are likely to differ between any two unrelated individuals. These three million genetic differences make a significant contribution to the observed variation in complex human phenotypes, such as disease susceptibility and our responses to drugs or environmental chemicals. Large-scale association studies taking place throughout the drug development process can help to identify such differences and tailor drugs and dose regimens to particular genotype classes. The need for such large-scale studies has driven the development of high-throughout SNP discovery and typing technologies, which are the subject of this review.

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Year:  2004        PMID: 15379655     DOI: 10.2174/1568026043387656

Source DB:  PubMed          Journal:  Curr Top Med Chem        ISSN: 1568-0266            Impact factor:   3.295


  8 in total

1.  Cell-based Models for Discovery of Pharmacogenomic Markers of Anticancer Agent Toxicity.

Authors:  Wei Zhang; R Stephanie Huang; M Eileen Dolan
Journal:  Trends Cancer Res       Date:  2008

Review 2.  Genomic medicine: genetic variation and its impact on the future of health care.

Authors:  Huntington F Willard; Misha Angrist; Geoffrey S Ginsburg
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2005-08-29       Impact factor: 6.237

3.  A highly fluorescent nucleoside analog based on thieno[3,4-d]pyrimidine senses mismatched pairing.

Authors:  Seergazhi G Srivatsan; Haim Weizman; Yitzhak Tor
Journal:  Org Biomol Chem       Date:  2008-03-10       Impact factor: 3.876

4.  Integrating Epigenomics into Pharmacogenomic Studies.

Authors:  Wei Zhang; R Stephanie Huang; M Eileen Dolan
Journal:  Pharmgenomics Pers Med       Date:  2008-11

5.  Site-specific labeling of T7 DNA polymerase with a conformationally sensitive fluorophore and its use in detecting single-nucleotide polymorphisms.

Authors:  Yu-Chih Tsai; Zhinan Jin; Kenneth A Johnson
Journal:  Anal Biochem       Date:  2008-09-14       Impact factor: 3.365

6.  Single nucleotide polymorphism discovery from expressed sequence tags in the waterflea Daphnia magna.

Authors:  Luisa Orsini; Mieke Jansen; Erika L Souche; Sarah Geldof; Luc De Meester
Journal:  BMC Genomics       Date:  2011-06-13       Impact factor: 3.969

7.  SeqDoC: rapid SNP and mutation detection by direct comparison of DNA sequence chromatograms.

Authors:  Mark L Crowe
Journal:  BMC Bioinformatics       Date:  2005-05-31       Impact factor: 3.169

8.  SNP discovery by mismatch-targeting of Mu transposition.

Authors:  Luisa Orsini; Maria Pajunen; Ilkka Hanski; Harri Savilahti
Journal:  Nucleic Acids Res       Date:  2007-02-20       Impact factor: 16.971

  8 in total

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