Literature DB >> 15372075

SWI/SNF remodeling and p300-dependent transcription of histone variant H2ABbd nucleosomal arrays.

Dimitar Angelov1, André Verdel, Woojin An, Vladimir Bondarenko, Fabienne Hans, Cécile-Marie Doyen, Vassily M Studitsky, Ali Hamiche, Robert G Roeder, Philippe Bouvet, Stefan Dimitrov.   

Abstract

A histone variant H2ABbd was recently identified, but its function is totally unknown. Here we have studied the structural and functional properties of nucleosome and nucleosomal arrays reconstituted with this histone variant. We show that H2ABbd can replace the conventional H2A in the nucleosome, but this replacement results in alterations of the nucleosomal structure. The remodeling complexes SWI/SNF and ACF are unable to mobilize the variant H2ABbd nucleosome. However, SWI/SNF was able to increase restriction enzyme access to the variant nucleosome and assist the transfer of variant H2ABbd-H2B dimer to a tetrameric histone H3-H4 particle. In addition, the p300- and Gal4-VP16-activated transcription appeared to be more efficient for H2ABbd nucleosomal arrays than for conventional H2A arrays. The intriguing mechanisms by which H2ABbd affects both nucleosome remodeling and transcription are discussed.

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Year:  2004        PMID: 15372075      PMCID: PMC522799          DOI: 10.1038/sj.emboj.7600400

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  34 in total

1.  Nucleosome movement by CHRAC and ISWI without disruption or trans-displacement of the histone octamer.

Authors:  G Längst; E J Bonte; D F Corona; P B Becker
Journal:  Cell       Date:  1999-06-25       Impact factor: 41.582

Review 2.  Expression and purification of recombinant histones and nucleosome reconstitution.

Authors:  K Luger; T J Rechsteiner; T J Richmond
Journal:  Methods Mol Biol       Date:  1999

3.  The language of covalent histone modifications.

Authors:  B D Strahl; C D Allis
Journal:  Nature       Date:  2000-01-06       Impact factor: 49.962

4.  Higher concentrations of histone macroH2A in the Barr body are correlated with higher nucleosome density.

Authors:  P Y Perche; C Vourc'h; L Konecny; C Souchier; M Robert-Nicoud; S Dimitrov; S Khochbin
Journal:  Curr Biol       Date:  2000-11-30       Impact factor: 10.834

5.  A histone variant, Htz1p, and a Sir1p-like protein, Esc2p, mediate silencing at HMR.

Authors:  N Dhillon; R T Kamakaka
Journal:  Mol Cell       Date:  2000-10       Impact factor: 17.970

6.  ATP-dependent nucleosome remodeling and histone hyperacetylation synergistically facilitate transcription of chromatin.

Authors:  G Mizuguchi; A Vassilev; T Tsukiyama; Y Nakatani; C Wu
Journal:  J Biol Chem       Date:  2001-02-05       Impact factor: 5.157

7.  The interactions of yeast SWI/SNF and RSC with the nucleosome before and after chromatin remodeling.

Authors:  S M Sengupta; M VanKanegan; J Persinger; C Logie; B R Cairns; C L Peterson; B Bartholomew
Journal:  J Biol Chem       Date:  2001-04-20       Impact factor: 5.157

8.  A chromatin remodelling complex involved in transcription and DNA processing.

Authors:  X Shen; G Mizuguchi; A Hamiche; C Wu
Journal:  Nature       Date:  2000-08-03       Impact factor: 49.962

9.  Histone H2A.Z regulats transcription and is partially redundant with nucleosome remodeling complexes.

Authors:  M S Santisteban; T Kalashnikova; M M Smith
Journal:  Cell       Date:  2000-10-27       Impact factor: 41.582

10.  A novel chromatin protein, distantly related to histone H2A, is largely excluded from the inactive X chromosome.

Authors:  B P Chadwick; H F Willard
Journal:  J Cell Biol       Date:  2001-01-22       Impact factor: 10.539

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  34 in total

1.  Dynamics of the higher-order structure of chromatin.

Authors:  Ping Chen; Guohong Li
Journal:  Protein Cell       Date:  2010-11       Impact factor: 14.870

Review 2.  Histone variants in metazoan development.

Authors:  Laura A Banaszynski; C David Allis; Peter W Lewis
Journal:  Dev Cell       Date:  2010-11-16       Impact factor: 12.270

3.  Mechanism of polymerase II transcription repression by the histone variant macroH2A.

Authors:  Cécile-Marie Doyen; Woojin An; Dimitar Angelov; Vladimir Bondarenko; Flore Mietton; Vassily M Studitsky; Ali Hamiche; Robert G Roeder; Philippe Bouvet; Stefan Dimitrov
Journal:  Mol Cell Biol       Date:  2006-02       Impact factor: 4.272

4.  The NH2 tail of the novel histone variant H2BFWT exhibits properties distinct from conventional H2B with respect to the assembly of mitotic chromosomes.

Authors:  Mathieu Boulard; Thierry Gautier; Gaelh Ouengue Mbele; Véronique Gerson; Ali Hamiche; Dimitar Angelov; Philippe Bouvet; Stefan Dimitrov
Journal:  Mol Cell Biol       Date:  2006-02       Impact factor: 4.272

5.  Electrophoresis of positioned nucleosomes.

Authors:  Martin Castelnovo; Sébastian Grauwin
Journal:  Biophys J       Date:  2007-02-02       Impact factor: 4.033

6.  Dissection of the unusual structural and functional properties of the variant H2A.Bbd nucleosome.

Authors:  Cécile-Marie Doyen; Fabien Montel; Thierry Gautier; Hervé Menoni; Cyril Claudet; Marlène Delacour-Larose; Dimitri Angelov; Ali Hamiche; Jan Bednar; Cendrine Faivre-Moskalenko; Philippe Bouvet; Stefan Dimitrov
Journal:  EMBO J       Date:  2006-09-07       Impact factor: 11.598

7.  ATP-dependent chromatin remodeling is required for base excision repair in conventional but not in variant H2A.Bbd nucleosomes.

Authors:  Hervé Menoni; Didier Gasparutto; Ali Hamiche; Jean Cadet; Stefan Dimitrov; Philippe Bouvet; Dimitar Angelov
Journal:  Mol Cell Biol       Date:  2007-06-25       Impact factor: 4.272

8.  Atomic force microscopy imaging of SWI/SNF action: mapping the nucleosome remodeling and sliding.

Authors:  Fabien Montel; Emeline Fontaine; Philippe St-Jean; Martin Castelnovo; Cendrine Faivre-Moskalenko
Journal:  Biophys J       Date:  2007-04-27       Impact factor: 4.033

9.  Mammal-specific H2A variant, H2ABbd, is involved in apoptotic induction via activation of NF-κB signaling pathway.

Authors:  Takahiro Goshima; Midori Shimada; Jafar Sharif; Hiromi Matsuo; Toshinori Misaki; Yoshikazu Johmura; Kazuhiro Murata; Haruhiko Koseki; Makoto Nakanishi
Journal:  J Biol Chem       Date:  2014-02-28       Impact factor: 5.157

10.  Human histone chaperone nucleophosmin enhances acetylation-dependent chromatin transcription.

Authors:  V Swaminathan; A Hari Kishore; K K Febitha; Tapas K Kundu
Journal:  Mol Cell Biol       Date:  2005-09       Impact factor: 4.272

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