Literature DB >> 15371010

Functional engineered channels and pores (Review).

Hagan Bayley1, Lakmal Jayasinghe.   

Abstract

Significant progress has been made in membrane protein engineering over the last 5 years, based largely on the re-design of existing scaffolds. Engineering techniques that have been employed include direct genetic engineering, both covalent and non-covalent modification, unnatural amino acid mutagenesis and total synthesis aided by chemical ligation of unprotected fragments. Combinatorial mutagenesis and directed evolution remain, by contrast, underemployed. Techniques for assembling and purifying heteromeric multisubunit pores have been improved. Progress in the de novo design of channels and pores has been slower. But, we are at the beginning of a new era in membrane protein engineering based on the accelerating acquisition of structural information, a better understanding of molecular motion in membrane proteins, technical improvements in membrane protein refolding and the application of computational approaches developed for soluble proteins. In addition, the next 5 years should see further advances in the applications of engineered channels and pores, notably in therapeutics and sensor technology.

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Year:  2004        PMID: 15371010     DOI: 10.1080/09687680410001716853

Source DB:  PubMed          Journal:  Mol Membr Biol        ISSN: 0968-7688            Impact factor:   2.857


  61 in total

1.  Decreasing Transmembrane Segment Length Greatly Decreases Perfringolysin O Pore Size.

Authors:  Qingqing Lin; Tong Wang; Huilin Li; Erwin London
Journal:  J Membr Biol       Date:  2015-04-08       Impact factor: 1.843

Review 2.  Single molecule sensing by nanopores and nanopore devices.

Authors:  Li-Qun Gu; Ji Wook Shim
Journal:  Analyst       Date:  2009-12-22       Impact factor: 4.616

3.  Chemical modification of the bacterial porin OmpF: gain of selectivity by volume reduction.

Authors:  Maarten Vrouenraets; Jenny Wierenga; Wim Meijberg; Henk Miedema
Journal:  Biophys J       Date:  2005-11-18       Impact factor: 4.033

4.  The influence of amino acid protonation states on molecular dynamics simulations of the bacterial porin OmpF.

Authors:  Sameer Varma; See-Wing Chiu; Eric Jakobsson
Journal:  Biophys J       Date:  2005-09-23       Impact factor: 4.033

5.  Construction and optimization of a family of genetically encoded metabolite sensors by semirational protein engineering.

Authors:  Karen Deuschle; Sakiko Okumoto; Marcus Fehr; Loren L Looger; Leonid Kozhukh; Wolf B Frommer
Journal:  Protein Sci       Date:  2005-09       Impact factor: 6.725

6.  The leukocidin pore: evidence for an octamer with four LukF subunits and four LukS subunits alternating around a central axis.

Authors:  Lakmal Jayasinghe; Hagan Bayley
Journal:  Protein Sci       Date:  2005-10       Impact factor: 6.725

7.  Interactions of peptides with a protein pore.

Authors:  Liviu Movileanu; Jason P Schmittschmitt; J Martin Scholtz; Hagan Bayley
Journal:  Biophys J       Date:  2005-05-27       Impact factor: 4.033

8.  Rational combinatorial design of pore-forming beta-sheet peptides.

Authors:  Joshua M Rausch; Jessica R Marks; William C Wimley
Journal:  Proc Natl Acad Sci U S A       Date:  2005-07-14       Impact factor: 11.205

9.  Allosteric control of an ionotropic glutamate receptor with an optical switch.

Authors:  Matthew Volgraf; Pau Gorostiza; Rika Numano; Richard H Kramer; Ehud Y Isacoff; Dirk Trauner
Journal:  Nat Chem Biol       Date:  2005-12-11       Impact factor: 15.040

10.  Ionic current blockades from DNA and RNA molecules in the alpha-hemolysin nanopore.

Authors:  Tom Z Butler; Jens H Gundlach; Mark Troll
Journal:  Biophys J       Date:  2007-08-03       Impact factor: 4.033

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