Literature DB >> 15366915

The gas-phase structure of alanine.

Susana Blanco1, Alberto Lesarri, Juan C López, José L Alonso.   

Abstract

The jet-cooled rotational spectrum of neutral alanine has been studied using laser-ablation molecular-beam Fourier transform microwave spectroscopy (LA-MB-FTMW). The spectra of the two most stable forms were observed in the frequency range 6-18 GHz for the parent, (15)N alanine, three single (13)C species, and four single D species. The (14)N nuclear quadrupole coupling hyperfine structures have been resolved, and their comparison with those calculated theoretically confirms unambiguously the conformer assignments. The independent structures of both conformers have been determined experimentally for the first time using r(s) and r(0) procedures. In both cases, the amino acid backbone is nonplanar. For the most stable conformer I, the COOH group adopts a cis configuration and an asymmetric bifurcated hydrogen bond is formed between the amino group and carbonyl oxygen (r(N-H(a)...O=C) = 2.70(2) A and r(N-H(b)...O=C) = 2.88(2) A). For conformer IIa, the COOH group adopts a trans configuration and is stabilized by a O-H...N hydrogen bond (r(O-H...N) = 1.96(2) A). The relative conformer abundances in the supersonic expansion have also been investigated.

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Year:  2004        PMID: 15366915     DOI: 10.1021/ja048317c

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  10 in total

1.  Revealing the multiple structures of serine.

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2.  A reevaluation of computed proton affinities for the common alpha-amino acids.

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3.  Elucidating the multiple structures of pipecolic acid by rotational spectroscopy.

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Journal:  Phys Chem Chem Phys       Date:  2019-02-20       Impact factor: 3.676

4.  Different proton transfer channels for the transformation of zwitterionic alanine-(H₂O)(n=2-4) to nonzwitterionic alanine-(H₂O)(n=2-4): a density functional theory study.

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5.  Phenylisoserine in the gas-phase and water: Ab initio studies on neutral and zwitterion conformers.

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6.  A prevalent intraresidue hydrogen bond stabilizes proteins.

Authors:  Robert W Newberry; Ronald T Raines
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7.  Amino acid gas phase circular dichroism and implications for the origin of biomolecular asymmetry.

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8.  Structural features of the carbon-sulfur chemical bond: a semi-experimental perspective.

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Journal:  Can J Chem       Date:  2016-07-28       Impact factor: 1.118

9.  On the satisfaction of backbone-carbonyl lone pairs of electrons in protein structures.

Authors:  Gail J Bartlett; Derek N Woolfson
Journal:  Protein Sci       Date:  2016-02-25       Impact factor: 6.725

10.  Decoding the Structure of Non-Proteinogenic Amino Acids: The Rotational Spectrum of Jet-Cooled Laser-Ablated Thioproline.

Authors:  Juan Carlos López; Alberto Macario; Andrés Verde; Alfonso Pérez-Encabo; Susana Blanco
Journal:  Molecules       Date:  2021-12-14       Impact factor: 4.411

  10 in total

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