Literature DB >> 15364584

Gated electron transfers and electron pathways in azurin: a NMR dynamic study at multiple fields and temperatures.

Anastasia V Zhuravleva1, Dmitry M Korzhnev, Eriks Kupce, Alexander S Arseniev, Martin Billeter, Vladislav Yu Orekhov.   

Abstract

Dynamic properties of electron transfer pathways in a small blue copper cupredoxin are explored using an extensive 15N NMR relaxation study of reduced Pseudomonas aeruginosa azurin at four magnetic fields (500-900 MHz) and at two temperatures chosen well below the melting point of the protein. Following a careful model-free analysis, several protein regions with different dynamic regimes are identified. Nanosecond time-scale mobility characterizes various residues of the hydrophobic surface patch believed to mark the natural entry point for electrons, notably the surface-exposed copper-ligand His117. These findings are consistent with a gated electron transfer process according to the "dynamic docking" model. Residues 47-49 along intramolecular pathways of electrons show rigidity that is remarkably conserved when increasing the temperature. Three different conformational exchange processes were observed in the millisecond range, one near the only disulfide bridge in the molecule and two near the copper ion. The latter two processes are consistent with previous data such as crystal structures at various pH values and NMR relaxation dispersion experiments; they may indicate an additional gated electron transfer mechanism at slower time-scales.

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Year:  2004        PMID: 15364584     DOI: 10.1016/j.jmb.2004.08.001

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  8 in total

1.  Flexibility of the metal-binding region in apo-cupredoxins.

Authors:  María-Eugenia Zaballa; Luciano A Abriata; Antonio Donaire; Alejandro J Vila
Journal:  Proc Natl Acad Sci U S A       Date:  2012-05-29       Impact factor: 11.205

2.  Model-free model elimination: a new step in the model-free dynamic analysis of NMR relaxation data.

Authors:  Edward J d'Auvergne; Paul R Gooley
Journal:  J Biomol NMR       Date:  2006-06-22       Impact factor: 2.835

3.  Model-free analysis for large proteins at high magnetic field strengths.

Authors:  Shou-Lin Chang; Andrew P Hinck; Rieko Ishima
Journal:  J Biomol NMR       Date:  2007-06-26       Impact factor: 2.835

4.  Simple tests for the validation of multiple field spin relaxation data.

Authors:  Sébastien Morin; Stéphane M Gagné
Journal:  J Biomol NMR       Date:  2009-10-20       Impact factor: 2.835

5.  Redox state dependence of axial ligand dynamics in Nitrosomonas europaea cytochrome c552.

Authors:  Ravinder Kaur; Kara L Bren
Journal:  J Phys Chem B       Date:  2013-08-20       Impact factor: 2.991

6.  Submolecular unfolding units of Pseudomonas aeruginosa cytochrome c-551.

Authors:  Lea V Michel; Kara L Bren
Journal:  J Biol Inorg Chem       Date:  2008-04-08       Impact factor: 3.358

7.  Optimisation of NMR dynamic models I. Minimisation algorithms and their performance within the model-free and Brownian rotational diffusion spaces.

Authors:  Edward J d'Auvergne; Paul R Gooley
Journal:  J Biomol NMR       Date:  2007-12-18       Impact factor: 2.835

8.  Molecular dynamics of a thermostable multicopper oxidase from Thermus thermophilus HB27: structural differences between the apo and holo forms.

Authors:  Martiniano Bello; Brenda Valderrama; Hugo Serrano-Posada; Enrique Rudiño-Piñera
Journal:  PLoS One       Date:  2012-07-10       Impact factor: 3.240

  8 in total

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