Literature DB >> 15364333

An intronic mutation causes long QT syndrome.

Li Zhang1, G Michael Vincent, Marco Baralle, Francisco E Baralle, Blake D Anson, D Woodrow Benson, Bryant Whiting, Katherine W Timothy, John Carlquist, Craig T January, Mark T Keating, Igor Splawski.   

Abstract

OBJECTIVES: The purpose of this research was to determine whether an intronic variant (T1945+6C) in KCNH2 is a disease-causing mutation, and if expanded phenotyping criteria produce improved identification of long QT syndrome (LQTS) patients.
BACKGROUND: Long QT syndrome is usually caused by mutations in conserved coding regions or invariant splice sites, yet no mutation is found in 30% to 50% of families. In one such family, we identified an intronic variant in KCNH2. Long QT syndrome diagnosis is hindered by reduced penetrance, as the long QT phenotype is absent on baseline electrocardiogram (ECG) in about 30%.
METHODS: Fifty-two family members were phenotyped by baseline QTc, QTc maximum on serial ECGs (Ser QTc-max), and on exercise ECGs (Ex QTc-max) and by T-wave patterns. Linkage analysis tested association of the intronic change with phenotype. The consequences of T1945+6C on splicing was studied using a minigene system and on function by heterologous expression.
RESULTS: Expanded phenotype/pedigree criteria identified 23 affected and 29 unaffected. Affected versus unaffected had baseline QTc 484 +/- 48 ms versus 422 +/- 20 ms, Ser QTc-max 508 +/- 48 ms versus 448 +/- 10 ms, Ex QTc-max 513 +/- 54 ms versus 444 +/- 11 ms, and LQT2 T waves in 87% versus 0%. Linkage analysis demonstrated a logarithm of odds score of 10.22. Splicing assay showed T1945+6C caused downstream intron retention. Complementary deoxyribonucleic acid with retained intron 7 failed to produce functional channels.
CONCLUSIONS: T1945+6C is a disease-causing mutation. It alters KCNH2 splicing and cosegregates with the LQT2 phenotype. Expanded ECG criteria plus pedigree analysis provided accurate clinical diagnosis of all carriers including those with reduced penetrance. Intronic mutations may be responsible for LQTS in some families with otherwise negative mutation screening.

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Year:  2004        PMID: 15364333     DOI: 10.1016/j.jacc.2004.06.045

Source DB:  PubMed          Journal:  J Am Coll Cardiol        ISSN: 0735-1097            Impact factor:   24.094


  13 in total

1.  Multiple splicing defects caused by hERG splice site mutation 2592+1G>A associated with long QT syndrome.

Authors:  Matthew R Stump; Qiuming Gong; Zhengfeng Zhou
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Review 2.  Splicing in action: assessing disease causing sequence changes.

Authors:  D Baralle; M Baralle
Journal:  J Med Genet       Date:  2005-10       Impact factor: 6.318

Review 3.  The alternative heart: impact of alternative splicing in heart disease.

Authors:  Enrique Lara-Pezzi; Jesús Gómez-Salinero; Alberto Gatto; Pablo García-Pavía
Journal:  J Cardiovasc Transl Res       Date:  2013-06-18       Impact factor: 4.132

4.  Identification of Kv11.1 isoform switch as a novel pathogenic mechanism of long-QT syndrome.

Authors:  Qiuming Gong; Matthew R Stump; Vivianne Deng; Li Zhang; Zhengfeng Zhou
Journal:  Circ Cardiovasc Genet       Date:  2014-07-15

Review 5.  Alternative splicing isoforms in health and disease.

Authors:  Hyoung Kyu Kim; Michael Huy Cuong Pham; Kyung Soo Ko; Byoung Doo Rhee; Jin Han
Journal:  Pflugers Arch       Date:  2018-03-13       Impact factor: 3.657

6.  A common polymorphism in SCN5A is associated with lone atrial fibrillation.

Authors:  L Y Chen; J D Ballew; K J Herron; R J Rodeheffer; T M Olson
Journal:  Clin Pharmacol Ther       Date:  2007-01       Impact factor: 6.875

Review 7.  Molecular Pathophysiology of Congenital Long QT Syndrome.

Authors:  M S Bohnen; G Peng; S H Robey; C Terrenoire; V Iyer; K J Sampson; R S Kass
Journal:  Physiol Rev       Date:  2017-01       Impact factor: 37.312

8.  Association of an intronic, but not any exonic, FRMD4B sequence variant and heart failure.

Authors:  Scot J Matkovich; Derek J Van Booven; Thomas P Cappola; Gerald W Dorn
Journal:  Clin Transl Sci       Date:  2010-08       Impact factor: 4.689

9.  A splice site mutation in hERG leads to cryptic splicing in human long QT syndrome.

Authors:  Qiuming Gong; Li Zhang; Arthur J Moss; G Michael Vincent; Michael J Ackerman; Jeffrey C Robinson; Melanie A Jones; David J Tester; Zhengfeng Zhou
Journal:  J Mol Cell Cardiol       Date:  2008-01-17       Impact factor: 5.000

10.  Upregulation of functional Kv11.1a isoform expression by modified U1 small nuclear RNA.

Authors:  Qiuming Gong; Matthew R Stump; Zhengfeng Zhou
Journal:  Gene       Date:  2017-10-21       Impact factor: 3.688

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