Literature DB >> 29536164

Alternative splicing isoforms in health and disease.

Hyoung Kyu Kim1,2, Michael Huy Cuong Pham3, Kyung Soo Ko1, Byoung Doo Rhee1, Jin Han4.   

Abstract

Alternative splicing (AS) of protein-coding messenger RNAs is an essential regulatory mechanism in eukaryotic gene expression that controls the proper function of proteins. It is also implicated in the physiological regulation of mitochondria and various ion channels. Considering that mis-splicing can result in various human diseases by modifying or abrogating important physiological protein functions, a fine-tuned balance of AS is essential for human health. Accumulated data highlight the importance of alternatively spliced isoforms in various diseases, including neurodegenerative disorders, cancer, immune and infectious diseases, cardiovascular diseases, and metabolic conditions. However, basic understanding of disease mechanisms and development of clinical applications still require the integration and interpretation of physiological roles of AS. This review discusses the roles of AS in health and various diseases, while highlighting potential AS-targeting therapeutic applications.

Entities:  

Keywords:  Cancer; Cardiovascular disease; Exon skipping; Intron; Metabolic disease; Mitochondria; Neurodegenerative diseases; Splicing factor

Mesh:

Substances:

Year:  2018        PMID: 29536164     DOI: 10.1007/s00424-018-2136-x

Source DB:  PubMed          Journal:  Pflugers Arch        ISSN: 0031-6768            Impact factor:   3.657


  170 in total

1.  Neuron-enriched RNA-binding Proteins Regulate Pancreatic Beta Cell Function and Survival.

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Journal:  J Biol Chem       Date:  2017-01-11       Impact factor: 5.157

2.  RNA-binding protein RBM24 is required for sarcomere assembly and heart contractility.

Authors:  Kar Lai Poon; Kar Tong Tan; Yang Ye Wei; Chee Peng Ng; Alan Colman; Vladimir Korzh; Xiu Qin Xu
Journal:  Cardiovasc Res       Date:  2012-02-15       Impact factor: 10.787

Review 3.  The hitchhiker's guide to PGC-1α isoform structure and biological functions.

Authors:  Vicente Martínez-Redondo; Amanda T Pettersson; Jorge L Ruas
Journal:  Diabetologia       Date:  2015-06-25       Impact factor: 10.122

Review 4.  New insights into IGF-1 signaling in the heart.

Authors:  Rodrigo Troncoso; Cristián Ibarra; Jose Miguel Vicencio; Enrique Jaimovich; Sergio Lavandero
Journal:  Trends Endocrinol Metab       Date:  2013-12-28       Impact factor: 12.015

5.  Variation in CAPN10 in relation to type 2 diabetes, obesity and quantitative metabolic traits: studies in 6018 whites.

Authors:  Dorit P Jensen; Søren A Urhammer; Hans Eiberg; Knut Borch-Johnsen; Torben Jørgensen; Torben Hansen; Oluf Pedersen
Journal:  Mol Genet Metab       Date:  2006-07-20       Impact factor: 4.797

6.  Alternatively spliced myeloid differentiation protein-2 inhibits TLR4-mediated lung inflammation.

Authors:  Gantsetseg Tumurkhuu; Jargalsaikhan Dagvadorj; Heather D Jones; Shuang Chen; Kenichi Shimada; Timothy R Crother; Moshe Arditi
Journal:  J Immunol       Date:  2015-01-09       Impact factor: 5.422

7.  Decreased alternative splicing of estrogen receptor-α mRNA in the Alzheimer's disease brain.

Authors:  Tatjana A Ishunina; Dick F Swaab
Journal:  Neurobiol Aging       Date:  2010-04-24       Impact factor: 4.673

8.  Splicing factor SF3b as a target of the antitumor natural product pladienolide.

Authors:  Yoshihiko Kotake; Koji Sagane; Takashi Owa; Yuko Mimori-Kiyosue; Hajime Shimizu; Mai Uesugi; Yasushi Ishihama; Masao Iwata; Yoshiharu Mizui
Journal:  Nat Chem Biol       Date:  2007-07-22       Impact factor: 15.040

9.  Inhibitors of CLK protein kinases suppress cell growth and induce apoptosis by modulating pre-mRNA splicing.

Authors:  Shinsuke Araki; Ryo Dairiki; Yusuke Nakayama; Aiko Murai; Risa Miyashita; Misa Iwatani; Toshiyuki Nomura; Osamu Nakanishi
Journal:  PLoS One       Date:  2015-01-12       Impact factor: 3.240

10.  Association of two synonymous splicing-associated CpG single nucleotide polymorphisms in calpain 10 and solute carrier family 2 member 2 with type 2 diabetes.

Authors:  Maria Karambataki; Andigoni Malousi; Georgios Tzimagiorgis; Constantinos Haitoglou; Aikaterini Fragou; Elisavet Georgiou; Foteini Papadopoulou; Gerasimos E Krassas; Sofia Kouidou
Journal:  Biomed Rep       Date:  2016-12-29
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  47 in total

1.  Regulation effect of lipopolysaccharide on the alternative splicing and function of sweet taste receptor T1R2.

Authors:  Jian-Hui Zhu; Xin Zheng; Xian Peng; Xin Xu; Robert Margolskee; Xue-Dong Zhou
Journal:  Hua Xi Kou Qiang Yi Xue Za Zhi       Date:  2021-08-01

Review 2.  Alternative Splicing and Hypoxia Puzzle in Alzheimer's and Parkinson's Diseases.

Authors:  Eglė Jakubauskienė; Arvydas Kanopka
Journal:  Genes (Basel)       Date:  2021-08-20       Impact factor: 4.096

3.  Shifts in the immunoepigenomic landscape of monocytes in response to a diabetes-specific social support intervention: a pilot study among Native Hawaiian adults with diabetes.

Authors:  Christian K Dye; Michael J Corley; Claire Ing; Annette Lum-Jones; Dongmei Li; Marjorie K L M Mau; Alika K Maunakea
Journal:  Clin Epigenetics       Date:  2022-07-18       Impact factor: 7.259

4.  Identification of a Novel Role for Foxo3 Isoform2 in Osteoclastic Inhibition.

Authors:  Cheng Xu; Gregory J Vitone; Kazuki Inoue; Courtney Ng; Baohong Zhao
Journal:  J Immunol       Date:  2019-09-20       Impact factor: 5.422

Review 5.  Mechanisms of tissue and cell-type specificity in heritable traits and diseases.

Authors:  Idan Hekselman; Esti Yeger-Lotem
Journal:  Nat Rev Genet       Date:  2020-01-08       Impact factor: 53.242

6.  Arsenite Exposure Displaces Zinc from ZRANB2 Leading to Altered Splicing.

Authors:  Mayukh Banerjee; Ana P Ferragut Cardoso; Angeliki Lykoudi; Daniel W Wilkey; Jianmin Pan; Walter H Watson; Nichola C Garbett; Shesh N Rai; Michael L Merchant; J Christopher States
Journal:  Chem Res Toxicol       Date:  2020-04-27       Impact factor: 3.739

7.  Signature of gene aberrant alternative splicing events in pancreatic adenocarcinoma prognosis.

Authors:  Jun Yao; Yu-Chen Tang; Bin Yi; Jian Yang; Yun Chai; Ni Yin; Zi-Xiang Zhang; Yi-Jun Wei; De-Chun Li; Jian Zhou
Journal:  J Cancer       Date:  2021-03-31       Impact factor: 4.207

8.  Tissue-specific activation of gene expression by the Synergistic Activation Mediator (SAM) CRISPRa system in mice.

Authors:  Charleen Hunt; Suzanne A Hartford; Derek White; Evangelos Pefanis; Timothy Hanna; Clarissa Herman; Jarrell Wiley; Heather Brown; Qi Su; Yurong Xin; Dennis Voronin; Hien Nguyen; Judith Altarejos; Keith Crosby; Jeffery Haines; Sarah Cancelarich; Meghan Drummond; Sven Moller-Tank; Ryan Malpass; Jacqueline Buckley; Maria Del Pilar Molina-Portela; Gustavo Droguett; David Frendewey; Eric Chiao; Brian Zambrowicz; Guochun Gong
Journal:  Nat Commun       Date:  2021-05-13       Impact factor: 14.919

9.  Mitochondria homeostasis: Biology and involvement in hepatic steatosis to NASH.

Authors:  Yu-Feng Li; Zhi-Fu Xie; Qian Song; Jing-Ya Li
Journal:  Acta Pharmacol Sin       Date:  2022-02-01       Impact factor: 7.169

10.  LIQA: long-read isoform quantification and analysis.

Authors:  Yu Hu; Li Fang; Xuelian Chen; Jiang F Zhong; Mingyao Li; Kai Wang
Journal:  Genome Biol       Date:  2021-06-17       Impact factor: 13.583

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