Literature DB >> 15342238

Regulation of DNA binding of p53 by its C-terminal domain.

Richard L Weinberg1, Stefan M V Freund, Dmitry B Veprintsev, Mark Bycroft, Alan R Fersht.   

Abstract

The tumor suppressor p53 is a tetrameric multi-domain transcription factor. Its C-terminal domain is thought to regulate the binding of its core domain to specific recognition sequences in promoters. The mechanism of regulation by the C-terminal domain and the role of its post-translational modification are controversial. We have examined the binding of DNA in solution to a series of unmodified p53 constructs that lack various domains. The specific DNA sequences bind tightly to the core domain, irrespective of whether or not the C-terminal domain is part of the construct. Unmodified p53 is accordingly an active DNA binding protein. Non-specific DNA sequences do not inhibit directly the binding of the specific sequences to the core but bind to the C terminus and inhibit p53 via that binding mode. Using NMR, we identified the residues of the C terminus that interact with the non-specific DNA. They include residues that are known to be modified post-translationally. Our data provide direct support for the regulatory role of the C terminus in the activity of p53 and show that p53 containing the unmodified C terminus actively binds to short double-stranded DNA.

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Year:  2004        PMID: 15342238     DOI: 10.1016/j.jmb.2004.07.042

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  37 in total

1.  Functional anthology of intrinsic disorder. 1. Biological processes and functions of proteins with long disordered regions.

Authors:  Hongbo Xie; Slobodan Vucetic; Lilia M Iakoucheva; Christopher J Oldfield; A Keith Dunker; Vladimir N Uversky; Zoran Obradovic
Journal:  J Proteome Res       Date:  2007-03-29       Impact factor: 4.466

2.  Tumor suppressor p53 slides on DNA with low friction and high stability.

Authors:  Anahita Tafvizi; Fang Huang; Jason S Leith; Alan R Fersht; Leonid A Mirny; Antoine M van Oijen
Journal:  Biophys J       Date:  2008-04-18       Impact factor: 4.033

3.  Nucleosome Crowding in Chromatin Slows the Diffusion but Can Promote Target Search of Proteins.

Authors:  Ryo Kanada; Tsuyoshi Terakawa; Hiroo Kenzaki; Shoji Takada
Journal:  Biophys J       Date:  2019-05-11       Impact factor: 4.033

4.  p53 Dynamically Directs TFIID Assembly on Target Gene Promoters.

Authors:  R A Coleman; Z Qiao; S K Singh; C S Peng; M Cianfrocco; Z Zhang; A Piasecka; H Aldeborgh; G Basishvili; W L Liu
Journal:  Mol Cell Biol       Date:  2017-06-15       Impact factor: 4.272

5.  Long-range regulation of p53 DNA binding by its intrinsically disordered N-terminal transactivation domain.

Authors:  Alexander S Krois; H Jane Dyson; Peter E Wright
Journal:  Proc Natl Acad Sci U S A       Date:  2018-11-12       Impact factor: 11.205

6.  Fine-tuning p53 activity through C-terminal modification significantly contributes to HSC homeostasis and mouse radiosensitivity.

Authors:  Yunyuan V Wang; Mathias Leblanc; Norma Fox; Jian-Hua Mao; Kelsey L Tinkum; Kurt Krummel; Dannielle Engle; David Piwnica-Worms; Helen Piwnica-Worms; Allan Balmain; Kenneth Kaushansky; Geoffrey M Wahl
Journal:  Genes Dev       Date:  2011-07-01       Impact factor: 11.361

7.  Domain-domain interactions in full-length p53 and a specific DNA complex probed by methyl NMR spectroscopy.

Authors:  Michal Bista; Stefan M Freund; Alan R Fersht
Journal:  Proc Natl Acad Sci U S A       Date:  2012-09-12       Impact factor: 11.205

8.  Delivery of a monomeric p53 subdomain with mitochondrial targeting signals from pro-apoptotic Bak or Bax.

Authors:  Karina J Matissek; Abood Okal; Mohanad Mossalam; Carol S Lim
Journal:  Pharm Res       Date:  2014-03-15       Impact factor: 4.200

Review 9.  Pathological unfoldomics of uncontrolled chaos: intrinsically disordered proteins and human diseases.

Authors:  Vladimir N Uversky; Vrushank Davé; Lilia M Iakoucheva; Prerna Malaney; Steven J Metallo; Ravi Ramesh Pathak; Andreas C Joerger
Journal:  Chem Rev       Date:  2014-05-15       Impact factor: 60.622

10.  Effects of CpG methylation on recognition of DNA by the tumour suppressor p53.

Authors:  Miriana Petrovich; Dmitry B Veprintsev
Journal:  J Mol Biol       Date:  2008-12-06       Impact factor: 5.469

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