Literature DB >> 15340260

Promoter hypermethylation frequency and BRAF mutations distinguish hereditary non-polyposis colon cancer from sporadic MSI-H colon cancer.

A McGivern1, C V A Wynter, V L J Whitehall, T Kambara, K J Spring, M D Walsh, M A Barker, S Arnold, L A Simms, B A Leggett, J Young, J R Jass.   

Abstract

BACKGROUND: Colorectal cancers resulting from defective DNA mismatch repair can occur in both hereditary non-polyposis colon cancer (HNPCC) and in the sporadic setting. They are characterised by a high level of microsatellite instability (MSI-H) and superficially resemble each other in that they are frequently located in the proximal colon and share features such as circumscribed tumour margins and tumour-infiltrating lymphocytes. However, significant differences can be demonstrated at the molecular level including widespread promoter hypermethylation and BRAF -activating mutations which occur significantly less often in HNPCC. AIMS: In this study, we sought to determine whether the presence of widespread promoter hypermethylation and BRAF mutations would exclude HNPCC.
MATERIALS AND METHODS: We investigated the methylation status of four methylated in tumour markers (MINTs 1,2,12 and 31), and the promoter regions of 5 genes hMLH1, HPP1, MGMT, p16INK4A and p14ARF, in 21 sporadic MSI-H colorectal cancers and compared these with 18 cancers from HNPCC patients. The methylation status of CpG islands were determined by either methylation specific PCR (MSP) or combined bisulfite restricton analysis (COBRA). In addition we considered the BRAF mutation status of 18 HNPCC tumours and 19 sporadic MSI-H cancers which had been previously determined by RFLP analysis and confirmatory sequencing.
RESULTS: Methylation of the promoter regions in target genes occurred less frequently within the HNPCC tumours (27% of analyses), compared with the sporadic MSI-H tumours (59% of analyses) (P < 0.001). Methylation of MINTs 1, 2, 12 and 31 occurred in 4% of analyses for HNPCC tumours contrasted with 73% for sporadic MSI-H tumours (P < 0.001). BRAF mutations were detected in 74% of sporadic tumours but none of the HNPCC cancers tested.
CONCLUSIONS: The total number of genes and MINTs methylated in HNPCC was lower than in MSI-H colorectal tumours. No HNPCC tumour showed evidence of widespread promoter hypermethylation or BRAF mutation suggesting this feature could be used as a discriminator between familial and sporadic cases.

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Year:  2004        PMID: 15340260     DOI: 10.1023/B:FAME.0000039861.30651.c8

Source DB:  PubMed          Journal:  Fam Cancer        ISSN: 1389-9600            Impact factor:   2.375


  44 in total

1.  Hypermethylation-associated inactivation of p14(ARF) is independent of p16(INK4a) methylation and p53 mutational status.

Authors:  M Esteller; S Tortola; M Toyota; G Capella; M A Peinado; S B Baylin; J G Herman
Journal:  Cancer Res       Date:  2000-01-01       Impact factor: 12.701

2.  Epigenetic phenotypes distinguish microsatellite-stable and -unstable colorectal cancers.

Authors:  S A Kuismanen; M T Holmberg; R Salovaara; P Schweizer; L A Aaltonen; A de La Chapelle; M Nyström-Lahti; P Peltomäki
Journal:  Proc Natl Acad Sci U S A       Date:  1999-10-26       Impact factor: 11.205

3.  Genetic and epigenetic modification of MLH1 accounts for a major share of microsatellite-unstable colorectal cancers.

Authors:  S A Kuismanen; M T Holmberg; R Salovaara; A de la Chapelle; P Peltomäki
Journal:  Am J Pathol       Date:  2000-05       Impact factor: 4.307

4.  CpG island methylator phenotype in colorectal cancer.

Authors:  M Toyota; N Ahuja; M Ohe-Toyota; J G Herman; S B Baylin; J P Issa
Journal:  Proc Natl Acad Sci U S A       Date:  1999-07-20       Impact factor: 11.205

5.  Loci for efficient detection of microsatellite instability in hereditary non-polyposis colorectal cancer.

Authors:  M L Frazier; F A Sinicrope; C I Amos; K R Cleary; P M Lynch; B Levin; R Luthra
Journal:  Oncol Rep       Date:  1999 May-Jun       Impact factor: 3.906

6.  Hypermethylation of the hMLH1 promoter in colon cancer with microsatellite instability.

Authors:  J M Cunningham; E R Christensen; D J Tester; C Y Kim; P C Roche; L J Burgart; S N Thibodeau
Journal:  Cancer Res       Date:  1998-08-01       Impact factor: 12.701

7.  Methylation-specific PCR: a novel PCR assay for methylation status of CpG islands.

Authors:  J G Herman; J R Graff; S Myöhänen; B D Nelkin; S B Baylin
Journal:  Proc Natl Acad Sci U S A       Date:  1996-09-03       Impact factor: 11.205

8.  Activated BRAF targets proximal colon tumors with mismatch repair deficiency and MLH1 inactivation.

Authors:  Enric Domingo; Eloi Espín; Manel Armengol; Carla Oliveira; Mafalda Pinto; Alex Duval; Caroline Brennetot; Raquel Seruca; Richard Hamelin; Hiroyuki Yamamoto; Simó Schwartz
Journal:  Genes Chromosomes Cancer       Date:  2004-02       Impact factor: 5.006

9.  Frequency of hereditary nonpolyposis colorectal cancer. A prospective multicenter study in Finland.

Authors:  J P Mecklin; H J Järvinen; A Hakkiluoto; H Hallikas; K M Hiltunen; N Härkönen; I Kellokumpu; S Laitinen; J Ovaska; J Tulikoura
Journal:  Dis Colon Rectum       Date:  1995-06       Impact factor: 4.585

10.  Methylation of hMLH1 promoter correlates with the gene silencing with a region-specific manner in colorectal cancer.

Authors:  G Deng; E Peng; J Gum; J Terdiman; M Sleisenger; Y S Kim
Journal:  Br J Cancer       Date:  2002-02-12       Impact factor: 7.640

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  60 in total

1.  Annexin A10 is a marker for the serrated pathway of colorectal carcinoma.

Authors:  Sara A Sajanti; Juha P Väyrynen; Päivi Sirniö; Kai Klintrup; Jyrki Mäkelä; Anne Tuomisto; Markus J Mäkinen
Journal:  Virchows Arch       Date:  2014-11-14       Impact factor: 4.064

Review 2.  Finding the needle in a haystack: identification of cases of Lynch syndrome with MLH1 epimutation.

Authors:  Megan P Hitchins
Journal:  Fam Cancer       Date:  2016-07       Impact factor: 2.375

3.  MLH1 promoter hypermethylation in the analytical algorithm of Lynch syndrome: a cost-effectiveness study.

Authors:  Mireia Gausachs; Pilar Mur; Julieta Corral; Marta Pineda; Sara González; Llúcia Benito; Mireia Menéndez; Josep Alfons Espinàs; Joan Brunet; María Dolores Iniesta; Stephen B Gruber; Conxi Lázaro; Ignacio Blanco; Gabriel Capellá
Journal:  Eur J Hum Genet       Date:  2012-01-25       Impact factor: 4.246

4.  BRAF mutation and gene methylation frequencies of colorectal tumours with microsatellite instability increase markedly with patient age.

Authors:  B Iacopetta; W Q Li; F Grieu; A Ruszkiewicz; K Kawakami
Journal:  Gut       Date:  2006-08       Impact factor: 23.059

5.  The CpG island methylator phenotype in colorectal cancer.

Authors:  Wade S Samowitz
Journal:  J Mol Diagn       Date:  2007-07       Impact factor: 5.568

6.  De novo constitutional MLH1 epimutations confer early-onset colorectal cancer in two new sporadic Lynch syndrome cases, with derivation of the epimutation on the paternal allele in one.

Authors:  Ajay Goel; Thuy-Phuong Nguyen; Hon-Chiu E Leung; Takeshi Nagasaka; Jennifer Rhees; Erin Hotchkiss; Mildred Arnold; Pia Banerji; Minoru Koi; Chau-To Kwok; Deborah Packham; Lara Lipton; C Richard Boland; Robyn L Ward; Megan P Hitchins
Journal:  Int J Cancer       Date:  2011-02-15       Impact factor: 7.396

7.  Selection of patients with germline MLH1 mutated Lynch syndrome by determination of MLH1 methylation and BRAF mutation.

Authors:  Hanifa Bouzourene; Pierre Hutter; Lorena Losi; Patricia Martin; Jean Benhattar
Journal:  Fam Cancer       Date:  2010-06       Impact factor: 2.375

Review 8.  Serrated colorectal cancer: Molecular classification, prognosis, and response to chemotherapy.

Authors:  Oscar Murcia; Miriam Juárez; Eva Hernández-Illán; Cecilia Egoavil; Mar Giner-Calabuig; María Rodríguez-Soler; Rodrigo Jover
Journal:  World J Gastroenterol       Date:  2016-04-07       Impact factor: 5.742

Review 9.  Molecular and prognostic heterogeneity of microsatellite-unstable colorectal cancer.

Authors:  Jung Ho Kim; Gyeong Hoon Kang
Journal:  World J Gastroenterol       Date:  2014-04-21       Impact factor: 5.742

Review 10.  New genes emerging for colorectal cancer predisposition.

Authors:  Clara Esteban-Jurado; Pilar Garre; Maria Vila; Juan José Lozano; Anna Pristoupilova; Sergi Beltrán; Anna Abulí; Jenifer Muñoz; Francesc Balaguer; Teresa Ocaña; Antoni Castells; Josep M Piqué; Angel Carracedo; Clara Ruiz-Ponte; Xavier Bessa; Montserrat Andreu; Luis Bujanda; Trinidad Caldés; Sergi Castellví-Bel
Journal:  World J Gastroenterol       Date:  2014-02-28       Impact factor: 5.742

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