Literature DB >> 24587672

New genes emerging for colorectal cancer predisposition.

Clara Esteban-Jurado1, Pilar Garre1, Maria Vila1, Juan José Lozano1, Anna Pristoupilova1, Sergi Beltrán1, Anna Abulí1, Jenifer Muñoz1, Francesc Balaguer1, Teresa Ocaña1, Antoni Castells1, Josep M Piqué1, Angel Carracedo1, Clara Ruiz-Ponte1, Xavier Bessa1, Montserrat Andreu1, Luis Bujanda1, Trinidad Caldés1, Sergi Castellví-Bel1.   

Abstract

Colorectal cancer (CRC) is one of the most frequent neoplasms and an important cause of mortality in the developed world. This cancer is caused by both genetic and environmental factors although 35% of the variation in CRC susceptibility involves inherited genetic differences. Mendelian syndromes account for about 5% of the total burden of CRC, with Lynch syndrome and familial adenomatous polyposis the most common forms. Excluding hereditary forms, there is an important fraction of CRC cases that present familial aggregation for the disease with an unknown germline genetic cause. CRC can be also considered as a complex disease taking into account the common disease-commom variant hypothesis with a polygenic model of inheritance where the genetic components of common complex diseases correspond mostly to variants of low/moderate effect. So far, 30 common, low-penetrance susceptibility variants have been identified for CRC. Recently, new sequencing technologies including exome- and whole-genome sequencing have permitted to add a new approach to facilitate the identification of new genes responsible for human disease predisposition. By using whole-genome sequencing, germline mutations in the POLE and POLD1 genes have been found to be responsible for a new form of CRC genetic predisposition called polymerase proofreading-associated polyposis.

Entities:  

Keywords:  Colorectal neoplasm, genetic predisposition to disease; Genetic variant; Genotype-phenotype correlation; Next generation sequencing; Single nucleotide polymorphism

Mesh:

Year:  2014        PMID: 24587672      PMCID: PMC3934466          DOI: 10.3748/wjg.v20.i8.1961

Source DB:  PubMed          Journal:  World J Gastroenterol        ISSN: 1007-9327            Impact factor:   5.742


  57 in total

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Journal:  Cancer Res       Date:  2006-08-01       Impact factor: 12.701

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Journal:  Cell       Date:  2006-05-19       Impact factor: 41.582

4.  A subset of familial colorectal neoplasia kindreds linked to chromosome 9q22.2-31.2.

Authors:  Georgia L Wiesner; Denise Daley; Susan Lewis; Christine Ticknor; Petra Platzer; James Lutterbaugh; Melissa MacMillen; Boris Baliner; Joseph Willis; Robert C Elston; Sanford D Markowitz
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5.  Mutations in AXIN2 cause familial tooth agenesis and predispose to colorectal cancer.

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Authors:  Ian P M Tomlinson; Luis G Carvajal-Carmona; Sara E Dobbins; Albert Tenesa; Angela M Jones; Kimberley Howarth; Claire Palles; Peter Broderick; Emma E M Jaeger; Susan Farrington; Annabelle Lewis; James G D Prendergast; Alan M Pittman; Evropi Theodoratou; Bianca Olver; Marion Walker; Steven Penegar; Ella Barclay; Nicola Whiffin; Lynn Martin; Stephane Ballereau; Amy Lloyd; Maggie Gorman; Steven Lubbe; Bryan Howie; Jonathan Marchini; Clara Ruiz-Ponte; Ceres Fernandez-Rozadilla; Antoni Castells; Angel Carracedo; Sergi Castellvi-Bel; David Duggan; David Conti; Jean-Baptiste Cazier; Harry Campbell; Oliver Sieber; Lara Lipton; Peter Gibbs; Nicholas G Martin; Grant W Montgomery; Joanne Young; Paul N Baird; Steven Gallinger; Polly Newcomb; John Hopper; Mark A Jenkins; Lauri A Aaltonen; David J Kerr; Jeremy Cheadle; Paul Pharoah; Graham Casey; Richard S Houlston; Malcolm G Dunlop
Journal:  PLoS Genet       Date:  2011-06-02       Impact factor: 5.917

7.  Evaluation of germline BMP4 mutation as a cause of colorectal cancer.

Authors:  Steven J Lubbe; Alan M Pittman; Cornelis Matijssen; Philip Twiss; Bianca Olver; Amy Lloyd; Mobshra Qureshi; Nathan Brown; Emma Nye; Gordon Stamp; Julian Blagg; Richard S Houlston
Journal:  Hum Mutat       Date:  2010-10-14       Impact factor: 4.878

Review 8.  Technical and implementation issues in using next-generation sequencing of cancers in clinical practice.

Authors:  D Ulahannan; M B Kovac; P J Mulholland; J-B Cazier; I Tomlinson
Journal:  Br J Cancer       Date:  2013-07-25       Impact factor: 7.640

9.  Exome resequencing identifies potential tumor-suppressor genes that predispose to colorectal cancer.

Authors:  Christopher G Smith; Marc Naven; Rebecca Harris; James Colley; Hannah West; Ning Li; Yuan Liu; Richard Adams; Timothy S Maughan; Laura Nichols; Richard Kaplan; Michael J Wagner; Howard L McLeod; Jeremy P Cheadle
Journal:  Hum Mutat       Date:  2013-05-20       Impact factor: 4.878

10.  A colorectal cancer genome-wide association study in a Spanish cohort identifies two variants associated with colorectal cancer risk at 1p33 and 8p12.

Authors:  Ceres Fernandez-Rozadilla; Jean-Baptiste Cazier; Ian P Tomlinson; Luis G Carvajal-Carmona; Claire Palles; María J Lamas; Montserrat Baiget; Luis A López-Fernández; Alejandro Brea-Fernández; Anna Abulí; Luis Bujanda; Juan Clofent; Dolors Gonzalez; Rosa Xicola; Montserrat Andreu; Xavier Bessa; Rodrigo Jover; Xavier Llor; Víctor Moreno; Antoni Castells; Ángel Carracedo; Sergi Castellvi-Bel; Clara Ruiz-Ponte
Journal:  BMC Genomics       Date:  2013-01-26       Impact factor: 3.969

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  16 in total

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Review 2.  Genetic architecture of colorectal cancer.

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Review 3.  Genetic Testing for Polyposis Syndromes.

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Journal:  Clin Colon Rectal Surg       Date:  2016-12

4.  Association of a let-7 miRNA binding region of TGFBR1 with hereditary mismatch repair proficient colorectal cancer (MSS HNPCC).

Authors:  Rosa M Xicola; Sneha Bontu; Brian J Doyle; Jamie Rawson; Pilar Garre; Esther Lee; Miguel de la Hoya; Xavier Bessa; Joan Clofent; Luis Bujanda; Francesc Balaguer; Sergi Castellví-Bel; Cristina Alenda; Rodrigo Jover; Clara Ruiz-Ponte; Sapna Syngal; Montserrat Andreu; Angel Carracedo; Antoni Castells; Polly A Newcomb; Noralane Lindor; John D Potter; John A Baron; Nathan A Ellis; Trinidad Caldes; Xavier LLor
Journal:  Carcinogenesis       Date:  2016-05-27       Impact factor: 4.944

Review 5.  Clinical and molecular features of young-onset colorectal cancer.

Authors:  Veroushka Ballester; Shahrooz Rashtak; Lisa Boardman
Journal:  World J Gastroenterol       Date:  2016-02-07       Impact factor: 5.742

6.  Personalized sequencing and the future of medicine: discovery, diagnosis and defeat of disease.

Authors:  Edward D Esplin; Ling Oei; Michael P Snyder
Journal:  Pharmacogenomics       Date:  2014-11       Impact factor: 2.533

7.  High expression of peroxiredoxin 4 affects the survival time of colorectal cancer patients, but is not an independent unfavorable prognostic factor.

Authors:  Nan Yi; Ming Bing Xiao; Wen Kai Ni; Feng Jiang; Cui Hua Lu; Run-Zhou Ni
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Review 8.  Microbial imbalance and intestinal pathologies: connections and contributions.

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Journal:  Dis Model Mech       Date:  2014-10       Impact factor: 5.758

9.  Single nucleotide polymorphisms within interferon signaling pathway genes are associated with colorectal cancer susceptibility and survival.

Authors:  Shun Lu; Barbara Pardini; Bowang Cheng; Alessio Naccarati; Stefanie Huhn; Veronika Vymetalkova; Ludmila Vodickova; Thomas Buchler; Kari Hemminki; Pavel Vodicka; Asta Försti
Journal:  PLoS One       Date:  2014-10-28       Impact factor: 3.240

10.  Genetic association studies of alterations in protein function expose recessive effects on cancer predisposition.

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