Literature DB >> 15340160

Mapping activation and repression domains of the vnd/NK-2 homeodomain protein.

Alexander Stepchenko1, Marshall Nirenberg.   

Abstract

A transient transfection assay using Drosophila S2 tissue culture cells and WT and mutant Drosophila vnd/NK-2 homeobox cDNAs was used to localize repression and activation domains of vnd/NK-2 homeodomain protein. A repression domain was identified near the N terminus of vnd/NK-2 homeodomain protein (amino acid residues 154-193), which contains many hydrophobic amino acid residues. The major determinants of the repression domain were shown to be amino acid residues F155, W158, I161, L162, L163, and W166. Truncated protein consisting of the N-terminal repression domain and the DNA-binding homeodomain repressed transcription as efficiently as WT vnd/NK-2 protein. An activation domain was identified between the tinman domain and the homeodomain (amino acid residues 277-543), which consists of a glutamine-rich subdomain and two acidic subdomains. No effect was detected of the tinman domain or the NK-2-specific domain on either activation or repression of a beta-galactosidase reporter gene.

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Year:  2004        PMID: 15340160      PMCID: PMC516545          DOI: 10.1073/pnas.0404775101

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  45 in total

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2.  Sequence-specific DNA binding by the vnd/NK-2 homeodomain of Drosophila.

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Journal:  Proc Natl Acad Sci U S A       Date:  2002-09-13       Impact factor: 11.205

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5.  The three-dimensional structure of the vnd/NK-2 homeodomain-DNA complex by NMR spectroscopy.

Authors:  J M Gruschus; D H Tsao; L H Wang; M Nirenberg; J A Ferretti
Journal:  J Mol Biol       Date:  1999-06-11       Impact factor: 5.469

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Journal:  Cell       Date:  1988-01-15       Impact factor: 41.582

7.  Intramolecular control of transcriptional activity by the NK2-specific domain in NK-2 homeodomain proteins.

Authors:  H Watada; R G Mirmira; J Kalamaras; M S German
Journal:  Proc Natl Acad Sci U S A       Date:  2000-08-15       Impact factor: 11.205

8.  Nk6, a novel Drosophila homeobox gene regulated by vnd.

Authors:  Jay Uhler; James Garbern; Li Yang; John Kamholz; Dervla M Mellerick
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9.  Functional dissection of a eukaryotic transcriptional activator protein, GCN4 of yeast.

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10.  Analysis of Sp1 in vivo reveals multiple transcriptional domains, including a novel glutamine-rich activation motif.

Authors:  A J Courey; R Tjian
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  6 in total

1.  Identification and analysis of vnd/NK-2 homeodomain binding sites in genomic DNA.

Authors:  Lan-Hsiang Wang; Rebecca Chmelik; Derek Tang; Marshall Nirenberg
Journal:  Proc Natl Acad Sci U S A       Date:  2005-05-03       Impact factor: 11.205

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Journal:  Mol Cell Biol       Date:  2007-05       Impact factor: 4.272

4.  Role of T-box gene tbx-2 for anterior foregut muscle development in C. elegans.

Authors:  Pliny A Smith; Susan E Mango
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6.  The alternative protein isoform NK2B, encoded by the vnd/NK-2 proneural gene, directly activates transcription and is expressed following the start of cells differentiation.

Authors:  Alexander G Stepchenko; Elizaveta V Pankratova; Semen A Doronin; Pavel V Gulag; Sofia G Georgieva
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  6 in total

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