Literature DB >> 15340054

Granulocyte-macrophage colony-stimulating factor enhancer activation requires cooperation between NFAT and AP-1 elements and is associated with extensive nucleosome reorganization.

Brett V Johnson1, Andrew G Bert, Gregory R Ryan, Antony Condina, Peter N Cockerill.   

Abstract

The human granulocyte-macrophage colony-stimulating factor (GM-CSF) gene is activated by an NFAT-dependent enhancer forming an inducible DNase I hypersensitive (DH) site. The enhancer core comprising the DH site contains the GM330 and GM420 elements that bind NFAT and AP-1 cooperatively. Here we demonstrate that both elements are essential for enhancer activity and that Sp1 and AML1 sites in the enhancer become occupied in vivo only after activation. Chromatin structure analysis revealed that the GM-CSF enhancer core elements are divided between two adjacent nucleosomes that become destabilized and highly accessible after activation. Inducible chromatin reorganization was not restricted to the enhancer core but extended across a 3-kb domain of mobilized nucleosomes, within which the nucleosome repeat length was compressed from approximately 185 to 150 bp. The GM420 element is a high-affinity site that binds NFAT independently of AP-1 but depends on the linked AP-1 site for enhancer function. Nevertheless, just the NFAT motif from the GM420 element was sufficient to form a DH site within chromatin even in the absence of the AP-1 site. Hence, NFAT has the potential to cooperate with other transcription factors by promoting chromatin remodelling and increasing accessibility at inducible regulatory elements.

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Year:  2004        PMID: 15340054      PMCID: PMC515070          DOI: 10.1128/MCB.24.18.7914-7930.2004

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  53 in total

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Authors:  J C Gasson
Journal:  Blood       Date:  1991-03-15       Impact factor: 22.113

Review 2.  NF-ATp: a transcription factor required for the co-ordinate induction of several cytokine genes.

Authors:  A Rao
Journal:  Immunol Today       Date:  1994-06

3.  The granulocyte-macrophage colony-stimulating factor/interleukin 3 locus is regulated by an inducible cyclosporin A-sensitive enhancer.

Authors:  P N Cockerill; M F Shannon; A G Bert; G R Ryan; M A Vadas
Journal:  Proc Natl Acad Sci U S A       Date:  1993-03-15       Impact factor: 11.205

4.  The T-cell transcription factor NFATp is a substrate for calcineurin and interacts with Fos and Jun.

Authors:  J Jain; P G McCaffrey; Z Miner; T K Kerppola; J N Lambert; G L Verdine; T Curran; A Rao
Journal:  Nature       Date:  1993-09-23       Impact factor: 49.962

5.  Human granulocyte-macrophage colony-stimulating factor enhancer function is associated with cooperative interactions between AP-1 and NFATp/c.

Authors:  P N Cockerill; A G Bert; F Jenkins; G R Ryan; M F Shannon; M A Vadas
Journal:  Mol Cell Biol       Date:  1995-04       Impact factor: 4.272

6.  Nucleosome binding by the constitutive transcription factor Sp1.

Authors:  B Li; C C Adams; J L Workman
Journal:  J Biol Chem       Date:  1994-03-11       Impact factor: 5.157

7.  Interleukin-2 transcription is regulated in vivo at the level of coordinated binding of both constitutive and regulated factors.

Authors:  P A Garrity; D Chen; E V Rothenberg; B J Wold
Journal:  Mol Cell Biol       Date:  1994-03       Impact factor: 4.272

8.  A 3' enhancer in the IL-4 gene regulates cytokine production by Th2 cells and mast cells.

Authors:  Deborah C Solymar; Suneet Agarwal; Craig H Bassing; Frederick W Alt; Anjana Rao
Journal:  Immunity       Date:  2002-07       Impact factor: 31.745

9.  Binding of disparate transcriptional activators to nucleosomal DNA is inherently cooperative.

Authors:  C C Adams; J L Workman
Journal:  Mol Cell Biol       Date:  1995-03       Impact factor: 4.272

10.  Chromatin transitions during activation and repression of galactose-regulated genes in yeast.

Authors:  G Cavalli; F Thoma
Journal:  EMBO J       Date:  1993-12       Impact factor: 11.598

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  42 in total

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Authors:  Andrea L Wurster; Patricia Precht; Michael J Pazin
Journal:  Mol Immunol       Date:  2011-08-09       Impact factor: 4.407

2.  Modulation of NFAT-dependent gene expression by the RhoA signaling pathway in T cells.

Authors:  Whitney S Helms; Jerry L Jeffrey; Derek A Holmes; Michael B Townsend; Neil A Clipstone; Lishan Su
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3.  Nuclear factor of activated T cells 1 (NFAT1)-induced permissive chromatin modification facilitates nuclear factor-κB (NF-κB)-mediated interleukin-9 (IL-9) transactivation.

Authors:  Arijita Jash; Anupama Sahoo; Gi-Cheon Kim; Chang-Suk Chae; Ji-Sun Hwang; Jung-Eun Kim; Sin-Hyeog Im
Journal:  J Biol Chem       Date:  2012-03-15       Impact factor: 5.157

4.  NFATc1 targets cyclin A in the regulation of vascular smooth muscle cell multiplication during restenosis.

Authors:  Manjula Karpurapu; Dong Wang; Nikhlesh K Singh; Quanyi Li; Gadiparthi N Rao
Journal:  J Biol Chem       Date:  2008-07-29       Impact factor: 5.157

Review 5.  Molecular control of HIV-1 postintegration latency: implications for the development of new therapeutic strategies.

Authors:  Laurence Colin; Carine Van Lint
Journal:  Retrovirology       Date:  2009-12-04       Impact factor: 4.602

6.  Transcription-dependent silencing of inducible convergent transgenes in transgenic mice.

Authors:  Fernando J Calero-Nieto; Andrew G Bert; Peter N Cockerill
Journal:  Epigenetics Chromatin       Date:  2010-01-19       Impact factor: 4.954

7.  Runx1 binds as a dimeric complex to overlapping Runx1 sites within a palindromic element in the human GM-CSF enhancer.

Authors:  Sarion R Bowers; Fernando J Calero-Nieto; Stephanie Valeaux; Narcis Fernandez-Fuentes; Peter N Cockerill
Journal:  Nucleic Acids Res       Date:  2010-05-18       Impact factor: 16.971

8.  A modular enhancer is differentially regulated by GATA and NFAT elements that direct different tissue-specific patterns of nucleosome positioning and inducible chromatin remodeling.

Authors:  Andrew G Bert; Brett V Johnson; Euan W Baxter; Peter N Cockerill
Journal:  Mol Cell Biol       Date:  2007-02-05       Impact factor: 4.272

9.  Transcriptional complexes formed by NFAT dimers regulate the induction of T cell tolerance.

Authors:  Noemi Soto-Nieves; Irene Puga; Brian T Abe; Sanmay Bandyopadhyay; Ian Baine; Anjana Rao; Fernando Macian
Journal:  J Exp Med       Date:  2009-03-23       Impact factor: 14.307

10.  High nucleosome occupancy is encoded at human regulatory sequences.

Authors:  Desiree Tillo; Noam Kaplan; Irene K Moore; Yvonne Fondufe-Mittendorf; Andrea J Gossett; Yair Field; Jason D Lieb; Jonathan Widom; Eran Segal; Timothy R Hughes
Journal:  PLoS One       Date:  2010-02-09       Impact factor: 3.240

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