Literature DB >> 15331224

Bow ties, metabolism and disease.

Marie Csete1, John Doyle.   

Abstract

Highly organized, universal structures underlying biological and technological networks mediate effective trade-offs among efficiency, robustness and evolvability, with predictable fragilities that can be used to understand disease pathogenesis. The aims of this article are to describe the features of one common organizational architecture in biology, the bow tie. Large-scale organizational frameworks such as the bow tie are necessary starting points for higher-resolution modeling of complex biologic processes

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Year:  2004        PMID: 15331224     DOI: 10.1016/j.tibtech.2004.07.007

Source DB:  PubMed          Journal:  Trends Biotechnol        ISSN: 0167-7799            Impact factor:   19.536


  146 in total

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Journal:  Proc Natl Acad Sci U S A       Date:  2005-10-04       Impact factor: 11.205

2.  Isochron-based phase response analysis of circadian rhythms.

Authors:  Rudiyanto Gunawan; Francis J Doyle
Journal:  Biophys J       Date:  2006-06-30       Impact factor: 4.033

Review 3.  Systems interface biology.

Authors:  Francis J Doyle; Jörg Stelling
Journal:  J R Soc Interface       Date:  2006-10-22       Impact factor: 4.118

4.  The theory of facilitated variation.

Authors:  John Gerhart; Marc Kirschner
Journal:  Proc Natl Acad Sci U S A       Date:  2007-05-09       Impact factor: 11.205

5.  Tying new knots in synthetic biology.

Authors:  David K Karig; Michael L Simpson
Journal:  HFSP J       Date:  2008-04-17

6.  Photosynthetic metabolism of C3 plants shows highly cooperative regulation under changing environments: a systems biological analysis.

Authors:  Ruoyu Luo; Haibin Wei; Lin Ye; Kankan Wang; Fan Chen; Lijun Luo; Lei Liu; Yuanyuan Li; M James C Crabbe; Li Jin; Yixue Li; Yang Zhong
Journal:  Proc Natl Acad Sci U S A       Date:  2009-01-07       Impact factor: 11.205

Review 7.  Toward the dynamic interactome: it's about time.

Authors:  Teresa M Przytycka; Mona Singh; Donna K Slonim
Journal:  Brief Bioinform       Date:  2010-01-08       Impact factor: 11.622

8.  The functional structure of central carbon metabolism in Pseudomonas putida KT2440.

Authors:  Suresh Sudarsan; Sarah Dethlefsen; Lars M Blank; Martin Siemann-Herzberg; Andreas Schmid
Journal:  Appl Environ Microbiol       Date:  2014-06-20       Impact factor: 4.792

9.  Stress-Induced Mutagenesis: Implications in Cancer and Drug Resistance.

Authors:  Devon M Fitzgerald; P J Hastings; Susan M Rosenberg
Journal:  Annu Rev Cancer Biol       Date:  2017-03

10.  Decoding Calcium Signaling Dynamics during Drosophila Wing Disc Development.

Authors:  Pavel A Brodskiy; Qinfeng Wu; Dharsan K Soundarrajan; Francisco J Huizar; Jianxu Chen; Peixian Liang; Cody Narciso; Megan K Levis; Ninfamaria Arredondo-Walsh; Danny Z Chen; Jeremiah J Zartman
Journal:  Biophys J       Date:  2019-01-11       Impact factor: 4.033

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