Literature DB >> 15329383

Genomic representations using concatenates of Type IIB restriction endonuclease digestion fragments.

Torstein Tengs1, Thomas LaFramboise, Robert B Den, David N Hayes, Jianhua Zhang, Saikat DebRoy, Robert C Gentleman, Keith O'Neill, Bruce Birren, Matthew Meyerson.   

Abstract

We have developed a method for genomic representation using Type IIB restriction endonucleases. Representation by concatenation of restriction digests, or RECORD, is an approach to sample the fragments generated by cleavage with these enzymes. Here, we show that the RECORD libraries may be used for digital karyotyping and for pathogen identification by computational subtraction.

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Year:  2004        PMID: 15329383      PMCID: PMC516078          DOI: 10.1093/nar/gnh120

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  25 in total

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4.  Basic local alignment search tool.

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6.  CARAT: a novel method for allelic detection of DNA copy number changes using high density oligonucleotide arrays.

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7.  The mouse genome displays highly dynamic populations of KRAB-zinc finger protein genes and related genetic units.

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  9 in total

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