Literature DB >> 15326312

Effects of Q/N-rich, polyQ, and non-polyQ amyloids on the de novo formation of the [PSI+] prion in yeast and aggregation of Sup35 in vitro.

Irina L Derkatch1, Susan M Uptain, Tiago F Outeiro, Rajaraman Krishnan, Susan L Lindquist, Susan W Liebman.   

Abstract

Prions are infectious protein conformations that are generally ordered protein aggregates. In the absence of prions, newly synthesized molecules of these same proteins usually maintain a conventional soluble conformation. However, prions occasionally arise even without a homologous prion template. The conformational switch that results in the de novo appearance of yeast prions with glutamine/aspargine (Q/N)-rich prion domains (e.g., [PSI+]), is promoted by heterologous prions with a similar domain (e.g., [RNQ+], also known as [PIN+]), or by overexpression of proteins with prion-like Q-, N-, or Q/N-rich domains. This finding led to the hypothesis that aggregates of heterologous proteins provide an imperfect template on which the new prion is seeded. Indeed, we show that newly forming Sup35 and preexisting Rnq1 aggregates always colocalize when [PSI+] appearance is facilitated by the [RNQ+] prion, and that Rnq1 fibers enhance the in vitro formation of fibers by the prion domain of Sup35 (NM). The proteins do not however form mixed, interdigitated aggregates. We also demonstrate that aggregating variants of the polyQ-containing domain of huntingtin promote the de novo conversion of Sup35 into [PSI+]; whereas nonaggregating variants of huntingtin and aggregates of non-polyQ amyloidogenic proteins, transthyretin, alpha-synuclein, and synphilin do not. Furthermore, transthyretin and alpha-synuclein amyloids do not facilitate NM aggregation in vitro, even though in [PSI+] cells NM and transthyretin aggregates also occasionally colocalize. Our data, especially the in vitro reproduction of the highly specific heterologous seeding effect, provide strong support for the hypothesis of cross-seeding in the spontaneous initiation of prion states. Copyright 2004 The National Academy of Sciencs of the USA

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Year:  2004        PMID: 15326312      PMCID: PMC516497          DOI: 10.1073/pnas.0404968101

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  51 in total

1.  Interactions among prions and prion "strains" in yeast.

Authors:  Michael E Bradley; Herman K Edskes; Joo Y Hong; Reed B Wickner; Susan W Liebman
Journal:  Proc Natl Acad Sci U S A       Date:  2002-07-30       Impact factor: 11.205

Review 2.  Prions as protein-based genetic elements.

Authors:  Susan M Uptain; Susan Lindquist
Journal:  Annu Rev Microbiol       Date:  2002-01-30       Impact factor: 15.500

3.  The mechanisms of [URE3] prion elimination demonstrate that large aggregates of Ure2p are dead-end products.

Authors:  Leslie Ripaud; Laurent Maillet; Christophe Cullin
Journal:  EMBO J       Date:  2003-10-01       Impact factor: 11.598

Review 4.  Parkinson's disease and related alpha-synucleinopathies are brain amyloidoses.

Authors:  John Q Trojanowski; Virginia M-Y Lee
Journal:  Ann N Y Acad Sci       Date:  2003-06       Impact factor: 5.691

5.  Yeast cells provide insight into alpha-synuclein biology and pathobiology.

Authors:  Tiago Fleming Outeiro; Susan Lindquist
Journal:  Science       Date:  2003-12-05       Impact factor: 47.728

6.  Aggregation of expanded polyglutamine domain in yeast leads to defects in endocytosis.

Authors:  Anatoli B Meriin; Xiaoqian Zhang; Nicholas B Miliaras; Alex Kazantsev; Yury O Chernoff; J Michael McCaffery; Beverly Wendland; Michael Y Sherman
Journal:  Mol Cell Biol       Date:  2003-11       Impact factor: 4.272

7.  Importance of low-oligomeric-weight species for prion propagation in the yeast prion system Sup35/Hsp104.

Authors:  Saravanakumar Narayanan; Benjamin Bösl; Stefan Walter; Bernd Reif
Journal:  Proc Natl Acad Sci U S A       Date:  2003-07-22       Impact factor: 11.205

8.  Analysis of yeast prion aggregates with amyloid-staining compound in vivo.

Authors:  Yoko Kimura; Sumiko Koitabashi; Takashi Fujita
Journal:  Cell Struct Funct       Date:  2003-06       Impact factor: 2.212

Review 9.  Propagation of yeast prions.

Authors:  Mick F Tuite; Brian S Cox
Journal:  Nat Rev Mol Cell Biol       Date:  2003-11       Impact factor: 94.444

Review 10.  Interactions of amyloidogenic proteins.

Authors:  Benoit I Giasson; Virginia M-Y Lee; John Q Trojanowski
Journal:  Neuromolecular Med       Date:  2003       Impact factor: 4.103

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  113 in total

1.  The self-interaction of native TDP-43 C terminus inhibits its degradation and contributes to early proteinopathies.

Authors:  I-Fan Wang; Hsiang-Yu Chang; Shin-Chen Hou; Gunn-Guang Liou; Tzong-Der Way; C-K James Shen
Journal:  Nat Commun       Date:  2012-04-03       Impact factor: 14.919

Review 2.  Patterns of [PSI (+) ] aggregation allow insights into cellular organization of yeast prion aggregates.

Authors:  Jens Tyedmers
Journal:  Prion       Date:  2012-07-01       Impact factor: 3.931

3.  Distinct subregions of Swi1 manifest striking differences in prion transmission and SWI/SNF function.

Authors:  Zhiqiang Du; Emily T Crow; Hyun Seok Kang; Liming Li
Journal:  Mol Cell Biol       Date:  2010-08-02       Impact factor: 4.272

4.  Structural insights into a yeast prion illuminate nucleation and strain diversity.

Authors:  Rajaraman Krishnan; Susan L Lindquist
Journal:  Nature       Date:  2005-06-09       Impact factor: 49.962

Review 5.  Insights into intragenic and extragenic effectors of prion propagation using chimeric prion proteins.

Authors:  Heather L True; Tejas Kalastavadi; Elizabeth M H Tank
Journal:  Prion       Date:  2008-04-17       Impact factor: 3.931

6.  Dynamic interactions of Sup35p and PrP prion protein domains modulate aggregate nucleation and seeding.

Authors:  Carmen Krammer; Elisabeth Kremmer; Hermann M Schätzl; Ina Vorberg
Journal:  Prion       Date:  2008 Jul-Sep       Impact factor: 3.931

7.  Conformational switching within individual amyloid fibrils.

Authors:  Natallia Makarava; Valeriy G Ostapchenko; Regina Savtchenko; Ilia V Baskakov
Journal:  J Biol Chem       Date:  2009-03-27       Impact factor: 5.157

Review 8.  Prion propagation: the role of protein dynamics.

Authors:  John A Pezza; Tricia R Serio
Journal:  Prion       Date:  2007-01-10       Impact factor: 3.931

9.  Characterization of proteins associated with polyglutamine aggregates: a novel approach towards isolation of aggregates from protein conformation disorders.

Authors:  Yan Wang; Anatoli B Meriin; Catherine E Costello; Michael Y Sherman
Journal:  Prion       Date:  2007-04-16       Impact factor: 3.931

Review 10.  A brief overview of the Swi1 prion-[SWI+].

Authors:  Dustin K Goncharoff; Zhiqiang Du; Liming Li
Journal:  FEMS Yeast Res       Date:  2018-09-01       Impact factor: 2.796

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