Literature DB >> 15326307

Multiple ATP-hydrolyzing sites that potentially function in cytoplasmic dynein.

Yoshinori Takahashi1, Masaki Edamatsu, Yoko Y Toyoshima.   

Abstract

Cytoplasmic dynein is a minus-end-directed microtubule motor involved in numerous essential processes within eukaryotic cells, such as nuclear segregation and trafficking of intracellular particles. The motor domain of the dynein heavy chain comprises six tandemly linked AAA (ATPase associated with diverse cellular activities) modules (AAA1-AAA6). The first four modules include nucleotide-binding sites (Walker A or P-loop motifs), and each of the four sites appears to bind ATP. However, the role and the function of each binding site are unknown. Especially, the question of which P-loops are ATP-hydrolyzing sites has not been answered, because it is difficult to measure the ATPase activity of each P-loop. Here, we purified several truncated Saccharomyces cerevisiae cytoplasmic dynein fragments and their mutants expressed in Escherichia coli and then measured their ATPase activities. Our results suggest that there are multiple ATP-binding sites that have abilities to hydrolyze ATP in cytoplasmic dynein. Furthermore, a single AAA module is insufficient for ATP hydrolysis, and the adjacent module facing the ATP-binding site is necessary for ATP-hydrolyzing activity. Copyright 2004 The National Academy of Sciencs of the USA

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Year:  2004        PMID: 15326307      PMCID: PMC516486          DOI: 10.1073/pnas.0403429101

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  27 in total

1.  Regulation of monomeric dynein activity by ATP and ADP concentrations.

Authors:  K Shiroguchi; Y Y Toyoshima
Journal:  Cell Motil Cytoskeleton       Date:  2001-08

Review 2.  The molecular motor toolbox for intracellular transport.

Authors:  Ronald D Vale
Journal:  Cell       Date:  2003-02-21       Impact factor: 41.582

3.  Molecular dissection of the roles of nucleotide binding and hydrolysis in dynein's AAA domains in Saccharomyces cerevisiae.

Authors:  Samara L Reck-Peterson; Ronald D Vale
Journal:  Proc Natl Acad Sci U S A       Date:  2004-01-30       Impact factor: 11.205

4.  Replication factor C clamp loader subunit arrangement within the circular pentamer and its attachment points to proliferating cell nuclear antigen.

Authors:  Nina Yao; Lee Coryell; Dan Zhang; Roxana E Georgescu; Jeff Finkelstein; Maria M Coman; Manju M Hingorani; Mike O'Donnell
Journal:  J Biol Chem       Date:  2003-10-06       Impact factor: 5.157

5.  Dissociation of double-headed cytoplasmic dynein into single-headed species and its motile properties.

Authors:  Shiori Toba; Yoko Yano Toyoshima
Journal:  Cell Motil Cytoskeleton       Date:  2004-08

6.  Slow ADP-dependent acceleration of microtubule translocation produced by an axonemal dynein.

Authors:  Kenji Kikushima; Toshiki Yagi; Ritsu Kamiya
Journal:  FEBS Lett       Date:  2004-04-09       Impact factor: 4.124

7.  Cytoplasmic dynein functions as a gear in response to load.

Authors:  Roop Mallik; Brian C Carter; Stephanie A Lex; Stephen J King; Steven P Gross
Journal:  Nature       Date:  2004-02-12       Impact factor: 49.962

8.  Cleavage of structural proteins during the assembly of the head of bacteriophage T4.

Authors:  U K Laemmli
Journal:  Nature       Date:  1970-08-15       Impact factor: 49.962

9.  Ordered ATP hydrolysis in the gamma complex clamp loader AAA+ machine.

Authors:  Aaron Johnson; Mike O'Donnell
Journal:  J Biol Chem       Date:  2003-02-10       Impact factor: 5.157

10.  Regulation of the transcriptional activator NtrC1: structural studies of the regulatory and AAA+ ATPase domains.

Authors:  Seok-Yong Lee; Armando De La Torre; Dalai Yan; Sydney Kustu; B Tracy Nixon; David E Wemmer
Journal:  Genes Dev       Date:  2003-10-15       Impact factor: 11.361

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  21 in total

1.  Two independent switches regulate cytoplasmic dynein's processivity and directionality.

Authors:  Wilhelm J Walter; Michael P Koonce; Bernhard Brenner; Walter Steffen
Journal:  Proc Natl Acad Sci U S A       Date:  2012-03-12       Impact factor: 11.205

2.  Nucleotide-induced global conformational changes of flagellar dynein arms revealed by in situ analysis.

Authors:  Tandis Movassagh; Khanh Huy Bui; Hitoshi Sakakibara; Kazuhiro Oiwa; Takashi Ishikawa
Journal:  Nat Struct Mol Biol       Date:  2010-05-09       Impact factor: 15.369

3.  A simple theoretical model explains dynein's response to load.

Authors:  Yi Qin Gao
Journal:  Biophys J       Date:  2005-11-11       Impact factor: 4.033

4.  The affinity of the dynein microtubule-binding domain is modulated by the conformation of its coiled-coil stalk.

Authors:  I R Gibbons; Joan E Garbarino; Carol E Tan; Samara L Reck-Peterson; Ronald D Vale; Andrew P Carter
Journal:  J Biol Chem       Date:  2005-04-11       Impact factor: 5.157

5.  Microoxen: microorganisms to move microscale loads.

Authors:  Douglas B Weibel; Piotr Garstecki; Declan Ryan; Willow R DiLuzio; Michael Mayer; Jennifer E Seto; George M Whitesides
Journal:  Proc Natl Acad Sci U S A       Date:  2005-08-15       Impact factor: 11.205

6.  A structural model reveals energy transduction in dynein.

Authors:  Adrian W R Serohijos; Yiwen Chen; Feng Ding; Timothy C Elston; Nikolay V Dokholyan
Journal:  Proc Natl Acad Sci U S A       Date:  2006-11-22       Impact factor: 11.205

7.  Three-dimensional structure of cytoplasmic dynein bound to microtubules.

Authors:  Naoko Mizuno; Akihiro Narita; Takahide Kon; Kazuo Sutoh; Masahide Kikkawa
Journal:  Proc Natl Acad Sci U S A       Date:  2007-12-19       Impact factor: 11.205

8.  Kinetic models for the coordinated stepping of cytoplasmic dynein.

Authors:  Denis Tsygankov; Adrian W R Serohijos; Nikolay V Dokholyan; Timothy C Elston
Journal:  J Chem Phys       Date:  2009-01-14       Impact factor: 3.488

9.  The dynein stalk head, the microtubule binding-domain of dynein: NMR assignment and ligand binding.

Authors:  Youské Shimizu; Yusuke Kato; Hisayuki Morii; Masaki Edamatsu; Yoko Yano Toyoshima; Masaru Tanokura
Journal:  J Biomol NMR       Date:  2008-05-20       Impact factor: 2.835

Review 10.  Molecular motors: not quite like clockwork.

Authors:  L A Amos
Journal:  Cell Mol Life Sci       Date:  2008-02       Impact factor: 9.261

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